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Carg04230 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04230
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr01:636166..636918
RNA-Seq ExpressionCarg04230
SyntenyCarg04230
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606797.1 EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]6.1e-54100Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_022948690.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita moschata]3.0e-5399.07Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_022998271.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita maxima]4.3e-5297.2Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSL LPLPALSAPA GGGESLWKKMVLGSKPPRCVGKCLNCRPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_023525861.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Cucurbita pepo subsp. pepo]1.1e-5297.2Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPA GGGESLWKKMVLGSKPPRC+GKCLNCRPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

XP_038876854.1 EPIDERMAL PATTERNING FACTOR-like protein 8 [Benincasa hispida]3.8e-4083.18Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASP ++LKLVIA+AV  VFSLLLPLP  S  A+G  ESL KKMVLGSKPPRCVGKCLNCRPC A+LVVPEHRERKGFEA+L+RREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

TrEMBL top hitse value%identityAlignment
A0A0A0KWT7 Epidermal patterning factor-like protein3.6e-3676.85Show/hide
Query:  MASP-SNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK
        MASP +NLLKLV+AVA A VFSL L LP LS   V   ESL K+ VLGSKPPRCVGKCLNCRPC A+LVVPEHRE K FE +L+ REEDDSYYLLHWKCK
Subjt:  MASP-SNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK

Query:  CGNKLYQP
        CGNKLYQP
Subjt:  CGNKLYQP

A0A1S3BZD4 Epidermal patterning factor-like protein2.2e-3375Show/hide
Query:  MASPS-NLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK
        MASPS NLLK V+ V  A V SLLL L  LSA A     SL K+ VLGSKPPRCVGKCLNCRPC A+LVVPEH ERK FE +L+RREEDDSYYLLHWKCK
Subjt:  MASPS-NLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK

Query:  CGNKLYQP
        CGNKLYQP
Subjt:  CGNKLYQP

A0A5D3E1Z8 Epidermal patterning factor-like protein2.2e-3375Show/hide
Query:  MASPS-NLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK
        MASPS NLLK V+ V  A V SLLL L  LSA A     SL K+ VLGSKPPRCVGKCLNCRPC A+LVVPEH ERK FE +L+RREEDDSYYLLHWKCK
Subjt:  MASPS-NLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCK

Query:  CGNKLYQP
        CGNKLYQP
Subjt:  CGNKLYQP

A0A6J1GAL3 Epidermal patterning factor-like protein1.5e-5399.07Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

A0A6J1K9T3 Epidermal patterning factor-like protein2.1e-5297.2Show/hide
Query:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
        MASPSNLLKLVIAVAVAAVFSL LPLPALSAPA GGGESLWKKMVLGSKPPRCVGKCLNCRPC ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC
Subjt:  MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKC

Query:  GNKLYQP
        GNKLYQP
Subjt:  GNKLYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase1.6e-0433.85Show/hide
Query:  KMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        +++LGS+PP C  KC  C PC A LV+               R     YY   W C    K+Y P
Subjt:  KMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 83.4e-0734.02Show/hide
Query:  AVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP
        A+ VA +F  LL L  +S     G +   K+ V+GS+PP C  KC NC+PC+  L          F+      ++DDS  YY + W C+C +++++P
Subjt:  AVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.4e-0541.27Show/hide
Query:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKLY P
Subjt:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.7e-0440.32Show/hide
Query:  GSKPPRCVGKCLNCRPCMASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+ P
Subjt:  GSKPPRCVGKCLNCRPCMASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 21.2e-0432.05Show/hide
Query:  VLGSKPPRCVG-KCLNCRPCMASLVVPEHRERK--------------GFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        ++GS+PPRC   +C +C  C A + VP + + K                  D  R ++  +Y  + WKCKCGN +Y P
Subjt:  VLGSKPPRCVG-KCLNCRPCMASLVVPEHRERK--------------GFEADLNRREEDDSYYLLHWKCKCGNKLYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein2.4e-0834.02Show/hide
Query:  AVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP
        A+ VA +F  LL L  +S     G +   K+ V+GS+PP C  KC NC+PC+  L          F+      ++DDS  YY + W C+C +++++P
Subjt:  AVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDS--YYLLHWKCKCGNKLYQP

AT2G30370.1 allergen-related1.7e-0641.27Show/hide
Query:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKLY P
Subjt:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

AT2G30370.2 allergen-related1.7e-0641.27Show/hide
Query:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        LGS PPRC  KC  C PC    + VP                    YY   W+CKCGNKLY P
Subjt:  LGSKPPRCVGKCLNCRPCM-ASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.9e-0540.32Show/hide
Query:  GSKPPRCVGKCLNCRPCMASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        GS PP C  KC  C+PC      P H   + G    L        YY   W+CKCGNKL+ P
Subjt:  GSKPPRCVGKCLNCRPCMASLVVPEHRE-RKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP

AT4G37810.1 unknown protein8.5e-0632.05Show/hide
Query:  VLGSKPPRCVG-KCLNCRPCMASLVVPEHRERK--------------GFEADLNRREEDDSYYLLHWKCKCGNKLYQP
        ++GS+PPRC   +C +C  C A + VP + + K                  D  R ++  +Y  + WKCKCGN +Y P
Subjt:  VLGSKPPRCVG-KCLNCRPCMASLVVPEHRERK--------------GFEADLNRREEDDSYYLLHWKCKCGNKLYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAAGCAATCTTCTGAAACTCGTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTTGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGTGGGAGGCGG
CGAGAGTTTGTGGAAGAAGATGGTGTTGGGATCGAAGCCGCCAAGATGCGTAGGAAAATGCTTGAATTGCCGGCCGTGTATGGCGTCGCTGGTGGTGCCGGAGCACCGTG
AAAGGAAGGGGTTTGAAGCTGATTTGAATCGTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATATATATATTTTTTAATTTTATTTTACTGTTTGATTTGCAGAGACTGAAAATGGAGGAACTATTTGTGATTGACGGCCCCCACTTTATTTGATTCCTTCTAGTTTTGAA
CTCACCAATGCCTTTATGAGTTTAATATTTTCCATGGAAGCTTTAACAAAATCTGCTGTTCTTCTATTCCACCACTGTTTTGGGGAAGCTTTTCACTTTCTCATCCTTTC
CACAATGCCCACCAATTCCTTATATTGAAATCTCTTCCTTTATCTCTCATAAGACACAGAGCTTCTCTCACTCAGCTCCAATGGCTTCCCCAAGCAATCTTCTGAAACTC
GTCATCGCCGTTGCTGTGGCGGCTGTCTTCTCCCTCTTGCTTCCTCTTCCTGCATTATCAGCTCCGGCAGTGGGAGGCGGCGAGAGTTTGTGGAAGAAGATGGTGTTGGG
ATCGAAGCCGCCAAGATGCGTAGGAAAATGCTTGAATTGCCGGCCGTGTATGGCGTCGCTGGTGGTGCCGGAGCACCGTGAAAGGAAGGGGTTTGAAGCTGATTTGAATC
GTAGAGAAGAGGATGATAGCTATTATCTGTTGCATTGGAAATGTAAATGTGGGAATAAGCTTTATCAGCCATGAGAATATAATATGGTTTTCTGGGTTTTGCCATTAATG
GAGTTGGGTGTTGTTTATGG
Protein sequenceShow/hide protein sequence
MASPSNLLKLVIAVAVAAVFSLLLPLPALSAPAVGGGESLWKKMVLGSKPPRCVGKCLNCRPCMASLVVPEHRERKGFEADLNRREEDDSYYLLHWKCKCGNKLYQP