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Carg04258 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04258
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEA_2 domain-containing protein
Genome locationCarg_Chr01:512368..512727
RNA-Seq ExpressionCarg04258
SyntenyCarg04258
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR40256.1 hypothetical protein CICLE_v10026796mg [Citrus clementina]2.3e-1448.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV RGY   ++    +    T RWR++WR++K+EK+R+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

GAY51209.1 hypothetical protein CUMW_132530 [Citrus unshiu]1.1e-1448.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K++KKR+F C  SG  +VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

KAG6606769.1 hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5999.15Show/hide
Query:  MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
        MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTT+RWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
Subjt:  MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI

Query:  SSAILRRPPPEFVVLKLT
        SSAILRRPPPEFVVLKLT
Subjt:  SSAILRRPPPEFVVLKLT

KAG7036482.1 hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-60100Show/hide
Query:  MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
        MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI
Subjt:  MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAI

Query:  SSAILRRPPPEFVVLKLTA
        SSAILRRPPPEFVVLKLTA
Subjt:  SSAILRRPPPEFVVLKLTA

KDO51221.1 hypothetical protein CISIN_1g044132mg [Citrus sinensis]8.0e-1549.47Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K+EKKR+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

TrEMBL top hitse value%identityAlignment
A0A067EJZ4 Uncharacterized protein3.9e-1549.47Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K+EKKR+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A2H5PFR9 Uncharacterized protein5.1e-1548.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+RGY   ++    +    T RWR++WR++K++KKR+F C  SG  +VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A5C7IIL3 Uncharacterized protein4.8e-1344.33Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRC--GMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV+ GY   +++   V       WR++WR++K+EKKR+F C    S    VHVPY+P TY QNFD G +      DPD +SRSFSARFA+ S +  +
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRC--GMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

A0A6J1BGX9 uncharacterized protein LOC1104275356.2e-1346.88Show/hide
Query:  GYVERGYYSAVTVAVL--EKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        GY +  Y   +++ VL       RWR++WR+L +EKK++F C  S +  VHV Y+P TY QNFD G +      DPD +SRSFSARFA+ S +LRR
Subjt:  GYVERGYYSAVTVAVL--EKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

V4ST02 Uncharacterized protein1.1e-1448.42Show/hide
Query:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR
        YV RGY   ++    +    T RWR++WR++K+EK+R+F C  SG+  VHVPY+P TY QNFD G V      DPD  SRSFSARFA+ S + ++
Subjt:  YVERGYYSAVTV--AVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGAGTTGCTTAAGGGGCGCCGGCGGCGGGATTGGGTACGTGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAG
AGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGGTGTGGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACT
TCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATATCCTCCGCCATTTTGCGAAGGCCGCCGCCT
GAGTTTGTGGTTCTGAAACTGACAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGAGTTGCTTAAGGGGCGCCGGCGGCGGGATTGGGTACGTGGAAAGAGGGTACTACTCGGCGGTGACAGTGGCGGTTTTGGAGAAGACGACGGCGAGGTGGAG
AGTGGTGTGGCGGAGGCTGAAGAAGGAGAAGAAGAGAATGTTCAGGTGTGGTATGAGTGGGGCTCGTGAGGTGCACGTGCCGTATAATCCAAAGACGTATTTGCAGAACT
TCGATGATGGGTCTGTGATGATGGTCGGCGACGATGATCCTGACGCGATTAGTCGATCTTTCTCCGCTCGTTTCGCCATATCCTCCGCCATTTTGCGAAGGCCGCCGCCT
GAGTTTGTGGTTCTGAAACTGACAGCTTAG
Protein sequenceShow/hide protein sequence
MNLSCLRGAGGGIGYVERGYYSAVTVAVLEKTTARWRVVWRRLKKEKKRMFRCGMSGAREVHVPYNPKTYLQNFDDGSVMMVGDDDPDAISRSFSARFAISSAILRRPPP
EFVVLKLTA