CuGenDBv2

Gene ID	Carg04274
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor TINY-like
Genome location	Carg_Chr01:457098..457397
RNA-Seq Expression	Carg04274
Synteny	Carg04274
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606753.1 Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma subsp. sororia]

9.3e-49

100

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

KAG7036467.1 hypothetical protein SDJN02_00084, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.3e-49

100

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

XP_022949201.1 ethylene-responsive transcription factor TINY-like [Cucurbita moschata]

1.1e-44

94.95

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MPTDIQAAAAKAAAMVDFDST+PTTSSSN EEGSDELGEIVELPNIEEEISAES NKFELVDSVDWWGNPPYT AETDFFAGFSDQ TIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

XP_022997866.1 ethylene-responsive transcription factor TINY-like [Cucurbita maxima]

1.1e-44

94.95

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MP DIQAAAAKAAAMVDFDSTMPTTSSSN EEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDF  GFS QSTIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

XP_038906604.1 ethylene-responsive transcription factor TINY-like [Benincasa hispida]

8.4e-34

75.76

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MP DIQ AAAKAAAMVDFDS   + SSSN +EGSDELGEIVELPNIE +I AESWN+FE +DSVDWWGNPP+   E DF A FSDQST PV FDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHN5 ethylene-responsive transcription factor TINY

4.1e-34

78.79

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MP DIQ AAAKAAAMVDFDS   T S SN EEGSDELGEIVELPNIEE+I AESWN+FE +DSVDWWGNPP+T AE DF A FSDQST PV FD GDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

A0A5D3C9I7 Ethylene-responsive transcription factor TINY

4.1e-34

78.79

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MP DIQ AAAKAAAMVDFDS   T S SN EEGSDELGEIVELPNIEE+I AESWN+FE +DSVDWWGNPP+T AE DF A FSDQST PV FD GDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

A0A6J1GBC8 ethylene-responsive transcription factor TINY-like

5.1e-45

94.95

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MPTDIQAAAAKAAAMVDFDST+PTTSSSN EEGSDELGEIVELPNIEEEISAES NKFELVDSVDWWGNPPYT AETDFFAGFSDQ TIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

A0A6J1IP61 ethylene-responsive transcription factor TINY-like

7.9e-30

71.29

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTT-SSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQS-TIPVIFDGGDW
        MP DIQAAAAKAAAMVDFD+T   + SSSN E GSDELGEIVELPNIEE+I AESW++FE +DSVDWWGNPP+  AE DF   F+DQS T    F+GGDW
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTT-SSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQS-TIPVIFDGGDW

Query:  E
        E
Subjt:  E

A0A6J1K8P5 ethylene-responsive transcription factor TINY-like

5.1e-45

94.95

Show/hide

Query:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE
        MP DIQAAAAKAAAMVDFDSTMPTTSSSN EEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDF  GFS QSTIPVIFDGGDWE
Subjt:  MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G25810.1 Integrase-type DNA-binding superfamily protein

3.3e-04

39.08

Show/hide

Query:  PTDIQAAAAKAAAM---VDFDSTMPTTSSSNHEE------------GSDELGEIVELPNIEEEIS--AESWNKFELVDSVDWWGNPP
        P DIQ AA KAA M     F S+   T SS+               GS+ELGEIVELP++        +  N+F   DS D W  PP
Subjt:  PTDIQAAAAKAAAM---VDFDSTMPTTSSSNHEE------------GSDELGEIVELPNIEEEIS--AESWNKFELVDSVDWWGNPP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCCACAGATATTCAGGCTGCGGCAGCCAAGGCAGCGGCGATGGTCGATTTTGATTCAACCATGCCCACAACTTCGTCGTCCAATCATGAAGAAGGGTCGGATGAGTT
GGGGGAGATTGTGGAATTGCCCAATATTGAAGAGGAAATCAGCGCTGAGTCGTGGAACAAATTCGAGTTGGTTGACTCGGTGGATTGGTGGGGGAATCCGCCGTACACAG
TGGCGGAAACTGATTTCTTTGCAGGGTTTTCCGATCAGAGTACGATTCCGGTCATCTTCGACGGCGGCGATTGGGAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPTDIQAAAAKAAAMVDFDSTMPTTSSSNHEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAETDFFAGFSDQSTIPVIFDGGDWE

Carg04274 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome