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Carg04298 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04298
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamate receptor
Genome locationCarg_Chr01:328165..330828
RNA-Seq ExpressionCarg04298
SyntenyCarg04298
Gene Ontology termsGO:0007186 - G protein-coupled receptor signaling pathway (biological process)
GO:0034220 - ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004930 - G protein-coupled receptor activity (molecular function)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsIPR001828 - Receptor, ligand binding region
IPR028082 - Periplasmic binding protein-like I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606727.1 Glutamate receptor 2.7, partial [Cucurbita argyrosperma subsp. sororia]3.1e-45100Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

KAG7036443.1 Glutamate receptor 2.5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-54100Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSAGLNC
        MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSAGLNC
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSAGLNC

Query:  DAMFRTEYLI
        DAMFRTEYLI
Subjt:  DAMFRTEYLI

XP_022948814.1 glutamate receptor 2.7-like [Cucurbita moschata]9.0e-4598.96Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQ VIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

XP_022997901.1 glutamate receptor 2.7-like [Cucurbita maxima]5.5e-4293.75Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MA LG+KSHVPIISFSATTTMQSLSSRRNPYFFRATQIDS QVKPIASIFK FNWRQAV+IHSDDQYGEGILPSMRDALRE+NTRVADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

XP_023523601.1 glutamate receptor 2.7-like [Cucurbita pepo subsp. pepo]4.5e-4497.92Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKSHVPIISFSATTTMQSLS RRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINT VADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

TrEMBL top hitse value%identityAlignment
A0A1S3BHT8 Glutamate receptor3.8e-3379.17Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKS VPIISFSATT   SL+  RNPYFFRATQ+DSSQ KPIA+IF+ F+WRQ V+IHSDD+YGEG LPSMRDALRE +TRVA ETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

A0A5A7V5V8 Glutamate receptor3.8e-3379.17Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKS VPIISFSATT   SL+  RNPYFFRATQ+DSSQ KPIA+IF+ F+WRQ V+IHSDD+YGEG LPSMRDALRE +TRVA ETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

A0A6J1D4Y3 Glutamate receptor1.0e-3383.33Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKS VPIIS SATT    L+ RRNPYFFRATQIDSSQV+PIA+I K FNWRQAVIIHSDDQYGEG+LPSMRDALREINTR+  ETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

A0A6J1GB16 Glutamate receptor4.4e-4598.96Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQ VIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

A0A6J1K8T1 Glutamate receptor2.6e-4293.75Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        MA LG+KSHVPIISFSATTTMQSLSSRRNPYFFRATQIDS QVKPIASIFK FNWRQAV+IHSDDQYGEGILPSMRDALRE+NTRVADETAIPQSA
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

SwissProt top hitse value%identityAlignment
O04660 Glutamate receptor 2.11.2e-1848.96Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        M ++G+KS VPI+++SAT+   SL+S R+ YFFRAT  DSSQV  I  I K F WR+   ++ DD +GEGI+P + D L+EIN R+   T I  +A
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

O81776 Glutamate receptor 2.45.2e-1950Show/hide
Query:  DLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        ++G+KS VPIISFSAT+    L S R+PYFFR+T  DSSQV+ I+ I K F WR+ V ++ ++ +GEGI+P + DAL+ IN R+   T I  +A
Subjt:  DLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

Q9LFN5 Glutamate receptor 2.52.3e-1952.17Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI
        + +LG +S VPIISFSAT+ +  L S R+PYF RAT  DSSQV+ I++I + F WR+ V I+ D+++GEGILP++ DA +EIN R+   +AI
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI

Q9LFN8 Glutamate receptor 2.61.2e-1851.09Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI
        + +LG +S VPIISFSA++ +  L S R+PYF RAT  DSSQV  I++I + F WR+ V I++D+++GEGILP + DA +EIN R+   +AI
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI

Q9SHV1 Glutamate receptor 2.21.0e-1947.92Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        + ++G+KS VP++S+SAT+   SL+S R+PYFFRAT  DSSQV  I +I K F WR+ V ++ D+ +GEGI+P + D+L++IN R+   + IP +A
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

Arabidopsis top hitse value%identityAlignment
AT2G24720.1 glutamate receptor 2.27.4e-2147.92Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        + ++G+KS VP++S+SAT+   SL+S R+PYFFRAT  DSSQV  I +I K F WR+ V ++ D+ +GEGI+P + D+L++IN R+   + IP +A
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

AT4G31710.1 glutamate receptor 2.43.7e-2050Show/hide
Query:  DLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        ++G+KS VPIISFSAT+    L S R+PYFFR+T  DSSQV+ I+ I K F WR+ V ++ ++ +GEGI+P + DAL+ IN R+   T I  +A
Subjt:  DLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA

AT5G11180.1 glutamate receptor 2.68.2e-2051.09Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI
        + +LG +S VPIISFSA++ +  L S R+PYF RAT  DSSQV  I++I + F WR+ V I++D+++GEGILP + DA +EIN R+   +AI
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI

AT5G11210.1 glutamate receptor 2.51.6e-2052.17Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI
        + +LG +S VPIISFSAT+ +  L S R+PYF RAT  DSSQV+ I++I + F WR+ V I+ D+++GEGILP++ DA +EIN R+   +AI
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAI

AT5G27100.1 glutamate receptor 2.18.2e-2048.96Show/hide
Query:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA
        M ++G+KS VPI+++SAT+   SL+S R+ YFFRAT  DSSQV  I  I K F WR+   ++ DD +GEGI+P + D L+EIN R+   T I  +A
Subjt:  MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCTCGGGAAGAAATCTCACGTACCCATAATTTCATTCTCCGCGACAACGACAATGCAATCTCTGAGCTCTCGTCGGAATCCTTATTTTTTCCGAGCGACCCA
AATCGATTCATCGCAAGTAAAACCCATCGCCTCCATTTTTAAAGAGTTCAATTGGCGACAGGCGGTGATCATTCACTCCGATGATCAATACGGCGAGGGGATTCTTCCCT
CCATGAGAGACGCTCTTCGAGAAATTAACACTCGGGTCGCCGACGAGACGGCGATTCCTCAATCGGCGGGTCTCAACTGCGACGCGATGTTTCGAACGGAATACTTAATA
mRNA sequenceShow/hide mRNA sequence
CTTTAGAGTTAATCAAGAAGGAAGAAGTGGAAGCCATTGTTGGGCCACAGAGTTCATCTCAAGCAGTTTTCATGGCGGATCTCGGGAAGAAATCTCACGTACCCATAATT
TCATTCTCCGCGACAACGACAATGCAATCTCTGAGCTCTCGTCGGAATCCTTATTTTTTCCGAGCGACCCAAATCGATTCATCGCAAGTAAAACCCATCGCCTCCATTTT
TAAAGAGTTCAATTGGCGACAGGCGGTGATCATTCACTCCGATGATCAATACGGCGAGGGGATTCTTCCCTCCATGAGAGACGCTCTTCGAGAAATTAACACTCGGGTCG
CCGACGAGACGGCGATTCCTCAATCGGCGGGTCTCAACTGCGACGCGATGTTTCGAACGGAATACTTAATA
Protein sequenceShow/hide protein sequence
MADLGKKSHVPIISFSATTTMQSLSSRRNPYFFRATQIDSSQVKPIASIFKEFNWRQAVIIHSDDQYGEGILPSMRDALREINTRVADETAIPQSAGLNCDAMFRTEYLI