; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04330 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04330
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationCarg_Chr01:140238..144384
RNA-Seq ExpressionCarg04330
SyntenyCarg04330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606691.1 hypothetical protein SDJN03_00033, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7397.4Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPL----SPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASS
        MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPL    SPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASS
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPL----SPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASS

Query:  SPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        SPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  SPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

KAG7036411.1 hypothetical protein SDJN02_00028, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-202100Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP
        MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP

Query:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFKGYDEKKMKQRRQ
        PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFKGYDEKKMKQRRQ
Subjt:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFKGYDEKKMKQRRQ

Query:  QADNEGQASSLRVSSGVVSVGASLCASSCFDIQEIGLRVEEEVVKLGWIHSKRDSKWKKEISKKSKGQKISLENPAVLHSKLQQKKSFPDRKLRRKAGTS
        QADNEGQASSLRVSSGVVSVGASLCASSCFDIQEIGLRVEEEVVKLGWIHSKRDSKWKKEISKKSKGQKISLENPAVLHSKLQQKKSFPDRKLRRKAGTS
Subjt:  QADNEGQASSLRVSSGVVSVGASLCASSCFDIQEIGLRVEEEVVKLGWIHSKRDSKWKKEISKKSKGQKISLENPAVLHSKLQQKKSFPDRKLRRKAGTS

Query:  LTNKETEKEKREREGGEVRRILSDYGTRSKQSSKSTHNPIKFPLCILEFVAKSSQESEFFGGQSSKKWSSGFWVSASSSSSVLADLVDLLKSVPKTKQCC
        LTNKETEKEKREREGGEVRRILSDYGTRSKQSSKSTHNPIKFPLCILEFVAKSSQESEFFGGQSSKKWSSGFWVSASSSSSVLADLVDLLKSVPKTKQCC
Subjt:  LTNKETEKEKREREGGEVRRILSDYGTRSKQSSKSTHNPIKFPLCILEFVAKSSQESEFFGGQSSKKWSSGFWVSASSSSSVLADLVDLLKSVPKTKQCC

Query:  SCCCLACFEL
        SCCCLACFEL
Subjt:  SCCCLACFEL

XP_022948467.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]1.0e-6491.58Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSS--PPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSP
        MER FSTLIFVISGFAFSILSLLVESQARDGAIPSSS  PPPPPPSPPPPSPPPPPPPPPPLSPPQ    SPPPPSPS        PNFVPPPPPASSSP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSS--PPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSP

Query:  PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

XP_022998566.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]3.3e-6088.72Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPP-----PPPLSPPQSPPLSPP--PPSPSPNSVPPPPPNFVPPPPP
        MER  ST IFVISGFAFSILSLLVESQARDGAI SSSPPPPPPSPPPPSPPPPPPP      PPLSPPQSPP SPP  PP PSPN V PPPP FVPPPPP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPP-----PPPLSPPQSPPLSPP--PPSPSPNSVPPPPPNFVPPPPP

Query:  ASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        AS S PPPIFPPPPS PSLQHRSTP PPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  ASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

XP_023523257.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]2.2e-6793.65Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP
        MER FSTLIFVISGFAFSILSLLVESQARDGAI SSSPPPPPPSPPPPSPPPPPPPPPPLSPPQS      PP PSPN VPPPPPNFVPPPPPASSSPPP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP

Query:  PIFPPPPSLPSLQHRSTPPP-PPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        PIFPPPPSLPSLQHRSTPPP PPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  PIFPPPPSLPSLQHRSTPPP-PPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein5.8e-2660.11Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP
        MER  +TLIFVI+GFAFS+LSLLVESQ  DGA P+ SPP P   PP PSPPPPP PPPP  PP  PP++PPPPSPS       PP F PPPPP       
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP

Query:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
                 P  +HR  PPPP   +     K+PP   +N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLL  K
Subjt:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

A0A1S3CKG6 leucine-rich repeat extensin-like protein 31.0e-2260.11Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP
        MER  +TLIFVISGFAFS+LSLLVESQ  D A P+ S  PP PSPPPPSP PPPPP PP          PPPP       PPPPP  + PPP    SP P
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPP

Query:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        P F P P  P  +HR +PPPP   +     K+PP   +N N++  + SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLL  K
Subjt:  PIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

A0A438K6Z4 Uncharacterized protein1.9e-1650.73Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASS---S
        ME+ FSTL+FVI GF F I ++LV++Q++  + P+++  PPPPSPPPP PPPP P PPP  PP   PLSPPPP PSP+  PPP P+  PPPPP+ S   S
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASS---S

Query:  PPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRN--------------NNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQ
        PPPP  PPPP  P      TPP PP P    + K     S+N              NN        + +N+GK +GL FVGIA +LQICVVGFL FKRRQ
Subjt:  PPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRN--------------NNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQ

Query:  LLIFK
        LL  K
Subjt:  LLIFK

A0A6J1G9A4 leucine-rich repeat extensin-like protein 34.9e-6591.58Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSS--PPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSP
        MER FSTLIFVISGFAFSILSLLVESQARDGAIPSSS  PPPPPPSPPPPSPPPPPPPPPPLSPPQ    SPPPPSPS        PNFVPPPPPASSSP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSS--PPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSP

Query:  PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  PPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

A0A6J1KAI1 leucine-rich repeat extensin-like protein 31.6e-6088.72Show/hide
Query:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPP-----PPPLSPPQSPPLSPP--PPSPSPNSVPPPPPNFVPPPPP
        MER  ST IFVISGFAFSILSLLVESQARDGAI SSSPPPPPPSPPPPSPPPPPPP      PPLSPPQSPP SPP  PP PSPN V PPPP FVPPPPP
Subjt:  MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPP-----PPPLSPPQSPPLSPP--PPSPSPNSVPPPPPNFVPPPPP

Query:  ASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK
        AS S PPPIFPPPPS PSLQHRSTP PPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLL FK
Subjt:  ASSSPPPPIFPPPPSLPSLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGCTCATTCTCTACGTTGATCTTCGTCATTTCGGGGTTTGCTTTCAGTATTTTATCGCTTCTTGTTGAGTCTCAGGCTCGAGATGGAGCCATTCCCTCTTCCTC
GCCGCCTCCGCCTCCTCCATCTCCACCACCTCCATCTCCGCCACCGCCACCACCACCGCCACCACCGCTATCACCACCGCAATCACCACCGCTATCACCACCGCCCCCGT
CCCCGTCCCCGAACTCCGTCCCGCCTCCACCCCCAAACTTCGTCCCGCCTCCACCGCCTGCATCTTCATCTCCACCTCCGCCAATATTTCCCCCACCGCCTTCTCTGCCG
AGTCTCCAGCATCGTTCTACTCCGCCGCCGCCGCCTATTCCTGCATCCTCCGACGCGAATAAAAAACCACCCGAAGTGAGTCGGAATAACAACTCCCACAATATTGAAGG
GTCGAAGAGAAGTCTCAATATGGGGAAGAAAGTAGGGCTATTCTTTGTTGGTATTGCGGCAGTACTTCAAATCTGCGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGC
TCCTAATATTCAAGGGGTACGATGAAAAGAAAATGAAACAGAGGAGGCAGCAGGCGGATAATGAGGGGCAAGCATCTTCTCTTAGGGTCTCCTCAGGCGTTGTGAGTGTT
GGAGCTAGCTTGTGTGCATCATCGTGTTTTGATATTCAAGAGATTGGGTTAAGAGTTGAAGAGGAGGTGGTGAAGCTTGGATGGATTCATTCAAAAAGAGACAGCAAGTG
GAAAAAAGAAATATCGAAGAAAAGCAAAGGACAGAAAATCTCTCTTGAGAATCCTGCAGTTTTACATTCAAAACTTCAGCAAAAGAAAAGCTTCCCTGACCGCAAACTAA
GAAGAAAAGCAGGCACTTCACTCACTAACAAAGAGACAGAGAAAGAGAAGAGAGAGAGGGAGGGAGGTGAAGTGAGAAGGATACTATCAGATTACGGCACAAGAAGCAAG
CAGAGCAGCAAAAGTACTCATAACCCAATAAAATTTCCACTTTGTATACTTGAATTTGTGGCTAAATCAAGCCAGGAATCTGAGTTTTTTGGTGGGCAATCCTCAAAGAA
GTGGAGTAGTGGCTTCTGGGTTTCTGCATCATCTTCTTCCTCTGTTTTAGCTGATCTTGTTGATTTATTAAAATCTGTGCCCAAAACAAAGCAGTGTTGCTCTTGTTGTT
GCCTCGCCTGTTTCGAACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGCTCATTCTCTACGTTGATCTTCGTCATTTCGGGGTTTGCTTTCAGTATTTTATCGCTTCTTGTTGAGTCTCAGGCTCGAGATGGAGCCATTCCCTCTTCCTC
GCCGCCTCCGCCTCCTCCATCTCCACCACCTCCATCTCCGCCACCGCCACCACCACCGCCACCACCGCTATCACCACCGCAATCACCACCGCTATCACCACCGCCCCCGT
CCCCGTCCCCGAACTCCGTCCCGCCTCCACCCCCAAACTTCGTCCCGCCTCCACCGCCTGCATCTTCATCTCCACCTCCGCCAATATTTCCCCCACCGCCTTCTCTGCCG
AGTCTCCAGCATCGTTCTACTCCGCCGCCGCCGCCTATTCCTGCATCCTCCGACGCGAATAAAAAACCACCCGAAGTGAGTCGGAATAACAACTCCCACAATATTGAAGG
GTCGAAGAGAAGTCTCAATATGGGGAAGAAAGTAGGGCTATTCTTTGTTGGTATTGCGGCAGTACTTCAAATCTGCGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGC
TCCTAATATTCAAGGGGTACGATGAAAAGAAAATGAAACAGAGGAGGCAGCAGGCGGATAATGAGGGGCAAGCATCTTCTCTTAGGGTCTCCTCAGGCGTTGTGAGTGTT
GGAGCTAGCTTGTGTGCATCATCGTGTTTTGATATTCAAGAGATTGGGTTAAGAGTTGAAGAGGAGGTGGTGAAGCTTGGATGGATTCATTCAAAAAGAGACAGCAAGTG
GAAAAAAGAAATATCGAAGAAAAGCAAAGGACAGAAAATCTCTCTTGAGAATCCTGCAGTTTTACATTCAAAACTTCAGCAAAAGAAAAGCTTCCCTGACCGCAAACTAA
GAAGAAAAGCAGGCACTTCACTCACTAACAAAGAGACAGAGAAAGAGAAGAGAGAGAGGGAGGGAGGTGAAGTGAGAAGGATACTATCAGATTACGGCACAAGAAGCAAG
CAGAGCAGCAAAAGTACTCATAACCCAATAAAATTTCCACTTTGTATACTTGAATTTGTGGCTAAATCAAGCCAGGAATCTGAGTTTTTTGGTGGGCAATCCTCAAAGAA
GTGGAGTAGTGGCTTCTGGGTTTCTGCATCATCTTCTTCCTCTGTTTTAGCTGATCTTGTTGATTTATTAAAATCTGTGCCCAAAACAAAGCAGTGTTGCTCTTGTTGTT
GCCTCGCCTGTTTCGAACTGTAA
Protein sequenceShow/hide protein sequence
MERSFSTLIFVISGFAFSILSLLVESQARDGAIPSSSPPPPPPSPPPPSPPPPPPPPPPLSPPQSPPLSPPPPSPSPNSVPPPPPNFVPPPPPASSSPPPPIFPPPPSLP
SLQHRSTPPPPPIPASSDANKKPPEVSRNNNSHNIEGSKRSLNMGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLIFKGYDEKKMKQRRQQADNEGQASSLRVSSGVVSV
GASLCASSCFDIQEIGLRVEEEVVKLGWIHSKRDSKWKKEISKKSKGQKISLENPAVLHSKLQQKKSFPDRKLRRKAGTSLTNKETEKEKREREGGEVRRILSDYGTRSK
QSSKSTHNPIKFPLCILEFVAKSSQESEFFGGQSSKKWSSGFWVSASSSSSVLADLVDLLKSVPKTKQCCSCCCLACFEL