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Carg04343 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04343
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin-conjugating enzyme E2 34-like
Genome locationCarg_Chr01:80281..81072
RNA-Seq ExpressionCarg04343
SyntenyCarg04343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606678.1 hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia]1.4e-80100Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]2.5e-5879.74Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--STQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERN-SHTSNKRRVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA  ST+EE GRKWL Q KKSKKSWK T+FSWL SDK SK LPK E N  HTS+KR VHVSGPIYTGA 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--STQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERN-SHTSNKRRVHVSGPIYTGAT

Query:  TVDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TVDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022949073.1 uncharacterized protein LOC111452535 [Cucurbita moschata]2.0e-7999.33Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSG IYTGATTVD
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022998123.1 uncharacterized protein LOC111492863 [Cucurbita maxima]3.5e-7694.67Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA TQEETGRKWLAQ KKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSGPIYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_023525406.1 uncharacterized protein LOC111789028 [Cucurbita pepo subsp. pepo]1.4e-7293.33Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAK         EETGRKWLAQ KKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein3.7e-5575.5Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFK-ASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTV
        M++P FDDFD   NFSKFLEEAKHHA ++ FK AS +EET RKWLAQ KK+KKSWKNTLFSWL SDK SKSLPK E+N HT NKRRV+VSGPIY+ A T+
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFK-ASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTV

Query:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        DGRPR RP SGPIASLFNP+MRTE EIPYMCLHQL++P  N  YGPIYLVT
Subjt:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A5D3D6L0 Uncharacterized protein1.1e-5173.51Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFK-ASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTV
        M++  FDDFD   NFS FLEEAKHHA  +  K AS +EETGRK LAQ KK+KKSWKNTLFSWL SDK SKSLPK E+N HT NKRRV+VSGP+Y+ ATT 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFK-ASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTV

Query:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        +GRPR RP SGPIASLFNPSMRTE EIPYMCL QL++P  NH YGPIYLVT
Subjt:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203021.2e-5879.74Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--STQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERN-SHTSNKRRVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA  ST+EE GRKWL Q KKSKKSWK T+FSWL SDK SK LPK E N  HTS+KR VHVSGPIYTGA 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--STQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERN-SHTSNKRRVHVSGPIYTGAT

Query:  TVDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TVDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1GB15 uncharacterized protein LOC1114525359.7e-8099.33Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSG IYTGATTVD
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1KFX5 uncharacterized protein LOC1114928631.7e-7694.67Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA TQEETGRKWLAQ KKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSGPIYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVD

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATCCTTGTTTTGATGACTTTGATCCTCGTACCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAAAGAAGAGGATTTCAAGGCCTCAACACAAGA
AGAAACAGGAAGGAAATGGTTGGCACAACACAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCCTGGTTGAATAGTGACAAAACGAGCAAATCTCTTCCCAAAC
TAGAAAGAAATTCTCACACATCCAATAAAAGACGTGTTCATGTTTCGGGTCCGATTTACACTGGAGCTACGACCGTCGATGGCAGACCCCGACACCGTCCGACGTCTGGA
CCAATTGCGAGTCTCTTCAATCCAAGTATGCGAACCGAGATGGAGATCCCTTATATGTGTCTCCACCAGCTCACTAGCCCCATTCCTAATCACTATTATGGTCCAATTTA
TCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
ACTTTATTCCTTGATTTCTTTGTGGCTGCAAGTTCTTCTATGGCGGTTGTTGATCTTTCCCTCTTTTGCTTTAGATGCAGAGGAGCTTCCTGTTCGTTCTTCAATTTTGA
TGCCATTTCTTCTGATCCCTAAATTTGATGTGTCTGAATTCTCTGTTGCTTCTTGCCTTCTACCTTTCCTACCTAGTATTGCTTTGTTTGGTTGGCTGTCTTTTGTTCTT
TCAACACATCTGCTTCTCCTGATTTTGAGATGGACGATCCTTGTTTTGATGACTTTGATCCTCGTACCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAAA
GAAGAGGATTTCAAGGCCTCAACACAAGAAGAAACAGGAAGGAAATGGTTGGCACAACACAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCCTGGTTGAATAG
TGACAAAACGAGCAAATCTCTTCCCAAACTAGAAAGAAATTCTCACACATCCAATAAAAGACGTGTTCATGTTTCGGGTCCGATTTACACTGGAGCTACGACCGTCGATG
GCAGACCCCGACACCGTCCGACGTCTGGACCAATTGCGAGTCTCTTCAATCCAAGTATGCGAACCGAGATGGAGATCCCTTATATGTGTCTCCACCAGCTCACTAGCCCC
ATTCCTAATCACTATTATGGTCCAATTTATCTTGTTACATAG
Protein sequenceShow/hide protein sequence
MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFSWLNSDKTSKSLPKLERNSHTSNKRRVHVSGPIYTGATTVDGRPRHRPTSG
PIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT