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Carg04363 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04363
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein 230
Genome locationCarg_Chr04:20818248..20819216
RNA-Seq ExpressionCarg04363
SyntenyCarg04363
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]4.5e-5593.1Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]3.5e-5593.1Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]8.9e-59100Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]1.4e-5697.41Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]4.4e-5899.14Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A1S3C9X7 Transmembrane protein 2302.2e-5593.1Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2301.7e-5593.1Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2304.3e-59100Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 2306.8e-5797.41Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGY FASIPDY
Subjt:  AWRGANGYRFASIPDY

A0A6J1K312 Transmembrane protein 2301.7e-5593.1Show/hide
Query:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRYSSL+ DDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGANGYRFASIPDY
        AWRGANGYRFASIPDY
Subjt:  AWRGANGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2304.0e-1441.07Show/hide
Query:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS L++ DD  +D +  +  P          KIP+K+IALA  L L+G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q5R8X3 Transmembrane protein 2302.4e-1442.34Show/hide
Query:  VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  NGYRFASIPDY
         GY +  IPD+
Subjt:  NGYRFASIPDY

Q5ZLH4 Transmembrane protein 2301.8e-1441.07Show/hide
Query:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS LA+ DD  +D +  +  P          KIP+K+IALA+ L ++G+FL+ +   +L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q8CIB6 Transmembrane protein 2301.8e-1441.96Show/hide
Query:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+YS LA+ DD  +D +  +  P          KIP+K+IALA  L L+G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  ANGYRFASIPDY
          GY +  IPD+
Subjt:  ANGYRFASIPDY

Q96A57 Transmembrane protein 2301.4e-1442.34Show/hide
Query:  VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+FL+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  NGYRFASIPDY
         GY +  IPD+
Subjt:  NGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)4.3e-1141.89Show/hide
Query:  PWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K I+LA+ LL+ G+  + L +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)8.9e-4165.29Show/hide
Query:  MASRRNVRYSSLAADDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET
        MASRR+VRY+ L  D++D  Y     E   +DPRF Y+PKAFD++PWKSIALA+FLL LG  LL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRNVRYSSLAADDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGANGYRFASIPDY
        RIAYY+WRGA GYRFA+IP Y
Subjt:  RIAYYAWRGANGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)7.3e-1141.89Show/hide
Query:  PWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP
        P K IALA+ LL+ G+  +   +F+    + G++      + LG L F+PGFY TRIAYYA++G  G+ F++IP
Subjt:  PWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCTGCTGATGATAACGATCTTGATTATGAAGGAAGTCAATATGATCCTCGCTTTTACTATACCCCAAAAGCTTT
TGACAAGATCCCGTGGAAATCCATTGCTCTTGCTCTCTTCCTGTTGCTTCTTGGGTCATTCCTTTTGTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCTGGAGAGA
AATCACAAGCTTATGGTCTTTTAGCATTGGGCTTTCTAACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTC
GCTTCCATTCCCGATTACTAG
mRNA sequenceShow/hide mRNA sequence
AAAATCATAAAATGTAATCCGTTCTAGATGTCTTTTTAATGTGTTTGGTTCTTAATTTTAAAGGTGGCTTGAATTAGTTGAAATTTGAAGACTCCATTCTTGATATTCGT
TGCCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCTGCTGATGATAACGATCTTGATTATGAAGGAAGTCAATATGATCCTCGCTTTTACTATACCCCAAAAG
CTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTCTCTTCCTGTTGCTTCTTGGGTCATTCCTTTTGTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCTGGA
GAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGCTTTCTAACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCG
CTTCGCTTCCATTCCCGATTACTAG
Protein sequenceShow/hide protein sequence
MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRF
ASIPDY