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Carg04378 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04378
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:20760544..20761172
RNA-Seq ExpressionCarg04378
SyntenyCarg04378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039487.1 hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa]3.6e-0660.38Show/hide
Query:  MEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP
        +E+  H     SSS K  GGK RK+M+E+MDYADPGPN NTR SGYL PP  P
Subjt:  MEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP

KAG6602500.1 hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia]5.1e-37100Show/hide
Query:  MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
Subjt:  MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

KGN52468.1 hypothetical protein Csa_007886 [Cucumis sativus]2.4e-1055.29Show/hide
Query:  MDHPKIFPILLLL--FIILGFGVG----AMEAAAH-PGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        M HPK+F  LLLL  F++L F  G     +E+  H      S S K  GGK RK+M+E+MDYADPGPNTNTRSGYL PP  PP P
Subjt:  MDHPKIFPILLLL--FIILGFGVG----AMEAAAH-PGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

XP_023527249.1 uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-3093.59Show/hide
Query:  PKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        PKIFPILLLLFII GFGVGAMEAAAH G D SSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPP PPSS
Subjt:  PKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

XP_023527257.1 uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-2892.31Show/hide
Query:  PKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS
        PKIFPILLLLFII GFGVGAMEAAAH G D SSSQ KSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPP PPSS
Subjt:  PKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0KSB7 Uncharacterized protein1.2e-1055.29Show/hide
Query:  MDHPKIFPILLLL--FIILGFGVG----AMEAAAH-PGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        M HPK+F  LLLL  F++L F  G     +E+  H      S S K  GGK RK+M+E+MDYADPGPNTNTRSGYL PP  PP P
Subjt:  MDHPKIFPILLLL--FIILGFGVG----AMEAAAH-PGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

A0A540K4V3 Uncharacterized protein8.0e-0451.43Show/hide
Query:  LLLLFIILGFGVGAMEAAAHPGYDTS-SSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP
        LL LF   GFG   ME A H   D+S    K++ GK RK M+ VMDYADP PN N R+GY+  P  PP P
Subjt:  LLLLFIILGFGVGAMEAAAHPGYDTS-SSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLP

A0A5D3CUT5 Uncharacterized protein1.7e-0660.38Show/hide
Query:  MEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP
        +E+  H     SSS K  GGK RK+M+E+MDYADPGPN NTR SGYL PP  P
Subjt:  MEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTR-SGYLTPPSSP

A0A7J7NY32 Uncharacterized protein4.2e-0552.78Show/hide
Query:  ILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSG-YLTPPSSPPLPP
        IL L F   GFG G     +  G D S+S  K  G  R+ MMEVMDY+DP PNTN ++G  LTPPS PP PP
Subjt:  ILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSG-YLTPPSSPPLPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATC
GCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTT
CCCCTCCTCTGCCGCCCTCTTCATGA
mRNA sequenceShow/hide mRNA sequence
CATACCTTCCTTTTACTTTCCCTTCACAACTCTCTCTCTAGCTGCCTTATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGT
GGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATC
CAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGAATCTCAAATAATGATTTCTTCTCTGTTCTTCGTTTC
TCATATCATATTCTAACTTCCAAGTGTAAGGAATTGCACCTTTTGCTGTCAGATTTCCAGTAATTTGCTTCTAATATTCGATCAAATAATTACATTATTTTATGATTAAT
TATAACTTGGGTTTTGTGCCATACTAATAAACT
Protein sequenceShow/hide protein sequence
MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS