; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04402 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04402
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOB domain-containing protein
Genome locationCarg_Chr04:20589289..20590376
RNA-Seq ExpressionCarg04402
SyntenyCarg04402
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602476.1 LOB domain-containing protein 27, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6899.22Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDNDVVFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

KAG7033151.1 LOB domain-containing protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-94100Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPMIEYRMLNLKKHVTLVRNRPSKMCRNHRLSIYRGPISRTLQLVLV
        EELQQVKARVSMMKDLGIADDNDVVFPMIEYRMLNLKKHVTLVRNRPSKMCRNHRLSIYRGPISRTLQLVLV
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPMIEYRMLNLKKHVTLVRNRPSKMCRNHRLSIYRGPISRTLQLVLV

XP_022923199.1 LOB domain-containing protein 27-like [Cucurbita moschata]1.2e-6798.44Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDND VFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

XP_022990689.1 LOB domain-containing protein 27-like [Cucurbita maxima]1.5e-6798.44Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDN+VVFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

XP_023524776.1 LOB domain-containing protein 27-like [Cucurbita pepo subsp. pepo]4.1e-6899.22Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDNDVVFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

TrEMBL top hitse value%identityAlignment
A0A0A0KXA1 LOB domain-containing protein6.8e-5373.05Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MT+KGGT+QACA+CKYQRRRCSKDC LAPYFPADQPKMFQNAHRLFGV NIM ILKQV PSQKDETMTSIIYESNMRSRFPV+GCCGV+WQLHYQIQQV+
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKD-------------LGIADDNDVVFPM
        EEL+ V++RV M+K+              G+  +NDV +P+
Subjt:  EELQQVKARVSMMKD-------------LGIADDNDVVFPM

A0A5D3CTR4 LOB domain-containing protein 27-like5.2e-5371.33Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MT+KGGT+QACA+CKYQRRRCSKDC LAPYFPADQPKMFQNAHRLFGV NIM ILKQV PSQKDETMTSIIYESNMRSRFP++GCCGV+WQLHYQIQQV+
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKD---------------LGIADDNDVVFPM
        EEL+QV++RV M+K+               +G+  +ND+ +P+
Subjt:  EELQQVKARVSMMKD---------------LGIADDNDVVFPM

A0A6J1E5P8 LOB domain-containing protein 27-like5.7e-6898.44Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDND VFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

A0A6J1FMW4 LOB domain-containing protein 27-like5.2e-5370.47Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MT+KGGT+QACA+CKYQRRRCSKDC LAPYFPADQPKMFQNAHRLFGV NIM IL+QV  SQKDETMTSIIYESNMR+RFPV+GCCGVLWQLHYQIQQV+
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKD------LGIAD----DNDVVFPMIEYRMLNLKKH
        EEL+QV+ R++M KD      +GIA+     ND+V+P+   +   L+++
Subjt:  EELQQVKARVSMMKD------LGIAD----DNDVVFPMIEYRMLNLKKH

A0A6J1JSQ2 LOB domain-containing protein 27-like7.5e-6898.44Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMKDLGIADDNDVVFPM
        EELQQVKARVSMMKDLGIADDN+VVFP+
Subjt:  EELQQVKARVSMMKDLGIADDNDVVFPM

SwissProt top hitse value%identityAlignment
A1YKY7 Protein IAL18.3e-2442.45Show/hide
Query:  GTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQ
        GT   CA+CK+ RR+C  DC  APYFP D P+ F   HR+FG  N+  ++ ++ P Q+++ M S+ YE++MR R PVYGC GV+  L + ++Q+ ++L +
Subjt:  GTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQ

Query:  VKARVS
         K  +S
Subjt:  VKARVS

O04479 Protein ASYMMETRIC LEAVES 21.2e-2543.75Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T   CA+CK+ RR+C  +C  APYFP DQP+ F N H++FG  N+  +L ++ PSQ+++ + S+ YE++MR R PVYGC GV+  L +Q++Q+  +L   
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKDLGI
        K+ +S  + LGI
Subjt:  KARVSMMKDLGI

Q9LRW1 LOB domain-containing protein 226.2e-2749.54Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T QACA+CKYQRR+C+ DC LAPYFP D+ + F NAH+LFGV NI  I+K + P +KD  M +I+++S+ R+  PV GC G++ +L YQI+    EL+ V
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKD
          +++M +D
Subjt:  KARVSMMKD

Q9SHE9 LOB domain-containing protein 41.9e-2343.93Show/hide
Query:  KGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEEL
        K G    CA+CK  RRRC++DC  +PYFPAD+P+ F N HR+FG  N+  +L+++P  Q+ + ++S++YE+N R R PVYGC G +  L  QI  +  +L
Subjt:  KGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEEL

Query:  QQVKARV
           +A V
Subjt:  QQVKARV

Q9STS6 LOB domain-containing protein 276.2e-3558.77Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MT+KGGT+ ACA+CKYQRRRC+ DCPLAPYFPA+QPK+FQN HRLFGVR+I+ IL+++  +QK E M SII++S +R R PV+GC GV  QL Y I    
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMK
        EEL+ V +++ + +
Subjt:  EELQQVKARVSMMK

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein8.3e-2743.75Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T   CA+CK+ RR+C  +C  APYFP DQP+ F N H++FG  N+  +L ++ PSQ+++ + S+ YE++MR R PVYGC GV+  L +Q++Q+  +L   
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKDLGI
        K+ +S  + LGI
Subjt:  KARVSMMKDLGI

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein8.3e-2743.75Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T   CA+CK+ RR+C  +C  APYFP DQP+ F N H++FG  N+  +L ++ PSQ+++ + S+ YE++MR R PVYGC GV+  L +Q++Q+  +L   
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKDLGI
        K+ +S  + LGI
Subjt:  KARVSMMKDLGI

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein8.3e-2743.75Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T   CA+CK+ RR+C  +C  APYFP DQP+ F N H++FG  N+  +L ++ PSQ+++ + S+ YE++MR R PVYGC GV+  L +Q++Q+  +L   
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKDLGI
        K+ +S  + LGI
Subjt:  KARVSMMKDLGI

AT3G13850.1 LOB domain-containing protein 224.4e-2849.54Show/hide
Query:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV
        T QACA+CKYQRR+C+ DC LAPYFP D+ + F NAH+LFGV NI  I+K + P +KD  M +I+++S+ R+  PV GC G++ +L YQI+    EL+ V
Subjt:  TTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQV

Query:  KARVSMMKD
          +++M +D
Subjt:  KARVSMMKD

AT3G47870.1 LOB domain-containing protein 274.4e-3658.77Show/hide
Query:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS
        MT+KGGT+ ACA+CKYQRRRC+ DCPLAPYFPA+QPK+FQN HRLFGVR+I+ IL+++  +QK E M SII++S +R R PV+GC GV  QL Y I    
Subjt:  MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVS

Query:  EELQQVKARVSMMK
        EEL+ V +++ + +
Subjt:  EELQQVKARVSMMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGAAAGGCGGCACCACCCAAGCCTGCGCTTCTTGCAAATACCAACGTCGCCGCTGCTCCAAAGACTGCCCCTTAGCCCCATATTTCCCAGCCGATCAGCCCAA
GATGTTTCAAAACGCCCACCGCCTCTTCGGCGTCCGCAACATCATGAACATACTTAAGCAAGTCCCCCCCTCGCAAAAGGACGAGACAATGACTTCAATTATCTACGAGT
CCAACATGCGCTCTAGGTTTCCGGTTTATGGTTGTTGCGGCGTGTTGTGGCAACTCCATTATCAAATACAACAAGTTAGTGAAGAACTCCAACAAGTAAAAGCTAGGGTT
TCTATGATGAAGGACCTCGGGATTGCCGACGACAACGACGTCGTTTTTCCTATGATCGAATATCGTATGTTGAATCTAAAGAAGCATGTAACTCTAGTGCGGAATCGACC
TTCAAAGATGTGTCGGAATCATCGGCTGAGTATCTATCGAGGACCGATCTCAAGAACGCTGCAGCTTGTTTTAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGAAAGGCGGCACCACCCAAGCCTGCGCTTCTTGCAAATACCAACGTCGCCGCTGCTCCAAAGACTGCCCCTTAGCCCCATATTTCCCAGCCGATCAGCCCAA
GATGTTTCAAAACGCCCACCGCCTCTTCGGCGTCCGCAACATCATGAACATACTTAAGCAAGTCCCCCCCTCGCAAAAGGACGAGACAATGACTTCAATTATCTACGAGT
CCAACATGCGCTCTAGGTTTCCGGTTTATGGTTGTTGCGGCGTGTTGTGGCAACTCCATTATCAAATACAACAAGTTAGTGAAGAACTCCAACAAGTAAAAGCTAGGGTT
TCTATGATGAAGGACCTCGGGATTGCCGACGACAACGACGTCGTTTTTCCTATGATCGAATATCGTATGTTGAATCTAAAGAAGCATGTAACTCTAGTGCGGAATCGACC
TTCAAAGATGTGTCGGAATCATCGGCTGAGTATCTATCGAGGACCGATCTCAAGAACGCTGCAGCTTGTTTTAGTCTAACGAGTTAAGACCAAAACAAATAGACCCCCAA
ACATTTGTATGTAAGGAAGTTTAGATTTTGGTCTTTATTAGTTGTTATTGTTTATGGTTGGTTATCAAAGTTTGATCAAAATAAAGGAAGAGCTGAGATCAGTTGAGCGA
TCCCTTGAGT
Protein sequenceShow/hide protein sequence
MTMKGGTTQACASCKYQRRRCSKDCPLAPYFPADQPKMFQNAHRLFGVRNIMNILKQVPPSQKDETMTSIIYESNMRSRFPVYGCCGVLWQLHYQIQQVSEELQQVKARV
SMMKDLGIADDNDVVFPMIEYRMLNLKKHVTLVRNRPSKMCRNHRLSIYRGPISRTLQLVLV