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Carg04406 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04406
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 25
Genome locationCarg_Chr04:20572247..20573744
RNA-Seq ExpressionCarg04406
SyntenyCarg04406
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578608.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3884.44Show/hide
Query:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        M  NCRF + LFG FLFLG+IWFSFIG IDNASPASRRATD+QWK+IG  KHVFHWHSDFYSVSKRRVPNGPDPIHNRRV NSKQPP+RA
Subjt:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
KAG6602472.1 CLAVATA3/ESR (CLE)-related protein 25, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3096.97Show/hide
Query:  FIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        + GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Subjt:  FIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
KAG7033147.1 CLAVATA3/ESR (CLE)-related protein 25 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-46100Show/hide
Query:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Subjt:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
KGN52425.1 hypothetical protein Csa_008367 [Cucumis sativus]2.1e-3683.15Show/hide
Query:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVR
        ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSDFYSVSKRRVPNGPDPIHNRRVENS+QPP+R
Subjt:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVR
XP_022961025.1 uncharacterized protein LOC111461653 isoform X1 [Cucurbita moschata]5.1e-30100Show/hide
Query:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Subjt:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
TrEMBL top hitse value%identityAlignment
A0A0A0KS32 Uncharacterized protein1.0e-3683.15Show/hide
Query:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVR
        ME  C F + LFG FLFLGIIWFSFIG IDNAS ASRR TDMQWK+IG EKH FHWHSDFYSVSKRRVPNGPDPIHNRRVENS+QPP+R
Subjt:  MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVR
A0A5A7T759 CLAVATA3/ESR (CLE)-related protein 252.7e-1690.91Show/hide
Query:  ASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNR
        ASRR TDMQWK+IG EKH FHWHSDFYSVSKRRVPNGPDPIHNR
Subjt:  ASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNR
A0A6A1VIF3 CLAVATA3/ESR (CLE)-related protein 253.1e-1752.75Show/hide
Query:  RFFRLLFGVFLFLGIIWFSFIGGIDN----ASPASRRATDM--QWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        R FR LFG  LF+G+IWF  +G + N     S  + R+T++   WK+IG EKHV HW SD   VS+RRVPNGPDPIHNRR   +++PP R+
Subjt:  RFFRLLFGVFLFLGIIWFSFIGGIDN----ASPASRRATDM--QWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
A0A6J1HAQ4 uncharacterized protein LOC111461653 isoform X22.5e-30100Show/hide
Query:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Subjt:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
A0A6J1HAS8 uncharacterized protein LOC111461653 isoform X12.5e-30100Show/hide
Query:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
Subjt:  GGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA
SwissProt top hitse value%identityAlignment
Q8LFL4 CLAVATA3/ESR (CLE)-related protein 254.0e-0941.25Show/hide
Query:  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ-WKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPP
        R L GV   LG+I F  +G + N++P+   + +++  +  G + ++FH       VSKR+VPNGPDPIHNR+ E S++PP
Subjt:  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ-WKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPP
Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 263.2e-0670Show/hide
Query:  YSVSKRRVPNGPDPIHNRRVENSKQPPVRA
        Y  SKR+VP GPDPIHNRR  NS++PP RA
Subjt:  YSVSKRRVPNGPDPIHNRRVENSKQPPVRA
AT3G28455.1 CLAVATA3/ESR-RELATED 252.8e-1041.25Show/hide
Query:  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ-WKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPP
        R L GV   LG+I F  +G + N++P+   + +++  +  G + ++FH       VSKR+VPNGPDPIHNR+ E S++PP
Subjt:  RLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQ-WKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTCATAGGAGGGATTGATAATGCTAGTCCAGCATCCAG
AAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTGATTTCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATC
CAATCCATAACAGGAGAGTGGAGAATTCCAAACAACCACCAGTTCGAGCCTAA
mRNA sequenceShow/hide mRNA sequence
TCTTCCCACGCGAACACAAAGTACAGTTTCACTGATACCGTCTTTATATACAAACAAAACAGCCTTACAACCCGCCAATACCTCAGCCAACCGAATTAGTTTTCCATCTC
TCTTCTTTCTTCTTTCTTAGTCTATAGTTATCCATCTTCACTTCCATGCCCAGAAAATGTCTGATTTTAGTCATTTCTGTGTTTCTGTTCTGAATGGATGATGACCATTG
TTGGTCAATTGGAAGCTGTGAGTTTAGGAAAAAGGTTTGGGTGTAATGGAACCTAACTGTAGATTTTTTAGGCTTCTGTTTGGAGTTTTTCTCTTTCTTGGTATCATCTG
GTTTTCTTTCATAGGAGGGATTGATAATGCTAGTCCAGCATCCAGAAGAGCGACAGACATGCAGTGGAAGGTGATTGGAAGCGAGAAGCATGTCTTTCATTGGCATTCTG
ATTTCTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGAGAGTGGAGAATTCCAAACAACCACCAGTTCGAGCCTAAGCAAATCAAGGA
GATAGATCAGCTGCAGAAAAGGCTCAGAAATGAACAGTTAATTTTTTTTTTTTACCTGTAAGTAAATGGTTTTTATTTTTATTTTTATGCTCTCCATCAAGGATAGATCC
TGCATTGAGACTTTTGTCCCCTAAAGCACTGACATGG
Protein sequenceShow/hide protein sequence
MEPNCRFFRLLFGVFLFLGIIWFSFIGGIDNASPASRRATDMQWKVIGSEKHVFHWHSDFYSVSKRRVPNGPDPIHNRRVENSKQPPVRA