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Carg04427 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04427
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 33
Genome locationCarg_Chr04:20453589..20454038
RNA-Seq ExpressionCarg04427
SyntenyCarg04427
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016183.1 hypothetical protein SDJN02_21287, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1686Show/hide
Query:  LITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF
        L T + VFETDE LGNNRAG VMGFC+SPLGTPARLLWSTSFFRHKLMIF
Subjt:  LITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF
KAG7033126.1 hypothetical protein SDJN02_07179, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-46100Show/hide
Query:  YGKIPRLQEDGAESVGVLWSFHIIGNYKLRSDPDYQVYPLITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF
        YGKIPRLQEDGAESVGVLWSFHIIGNYKLRSDPDYQVYPLITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF
Subjt:  YGKIPRLQEDGAESVGVLWSFHIIGNYKLRSDPDYQVYPLITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF
PHU27564.1 hypothetical protein BC332_05896 [Capsicum chinense]5.6e-0585.71Show/hide
Query:  MGFCVSPLGTPARLLWSTSFFRHKLMIF
        MGFC+ PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCVSPLGTPARLLWSTSFFRHKLMIF
PIN00164.1 hypothetical protein CDL12_27332 [Handroanthus impetiginosus]4.3e-0582.76Show/hide
Query:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
        +MGFC+ PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
XP_030447493.1 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Syzygium oleosum]1.6e-0777.5Show/hide
Query:  EELGNNRAG-GVMGFCVSPLGTPARLLWSTSFFRHKLMIF
        EELG    G GVMGFC+ PL TPARLLWSTSFFRHKLM+F
Subjt:  EELGNNRAG-GVMGFCVSPLGTPARLLWSTSFFRHKLMIF
TrEMBL top hitse value%identityAlignment
A0A2G3D9B2 Uncharacterized protein2.7e-0585.71Show/hide
Query:  MGFCVSPLGTPARLLWSTSFFRHKLMIF
        MGFC+ PL TPARLLWSTSFFRHKLM+F
Subjt:  MGFCVSPLGTPARLLWSTSFFRHKLMIF
A0A2G9G4C3 Uncharacterized protein2.1e-0582.76Show/hide
Query:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
        +MGFC+ PL TPARLLWSTSFFRHKLM+F
Subjt:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
A0A2G9GBV9 Uncharacterized protein2.3e-0475.86Show/hide
Query:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
        +MGFC+ PL TPARLLW +SFFRHKLM+F
Subjt:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
A2NW02 A.thaliana homeobox gene Athb-1 mRNA6.1e-0579.31Show/hide
Query:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
        +MGFC+ PL +PARLLWSTSFFRHK+MIF
Subjt:  VMGFCVSPLGTPARLLWSTSFFRHKLMIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01472.1 conserved peptide upstream open reading frame 331.5e-0882.14Show/hide
Query:  MGFCVSPLGTPARLLWSTSFFRHKLMIF
        MGFC+ PL +PARLLWSTSFFRHK+MIF
Subjt:  MGFCVSPLGTPARLLWSTSFFRHKLMIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACGGAAAAATTCCAAGATTACAAGAGGATGGTGCCGAATCAGTAGGGGTATTATGGTCTTTTCACATTATTGGGAACTATAAATTGCGGTCGGACCCCGACTATCAAGT
TTACCCGCTGATAACAACCAGAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTGTTTCCCCATTGGGAACACCGGCTA
GGTTACTGTGGAGTACCAGCTTCTTCCGCCACAAGCTCATGATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
TACGGAAAAATTCCAAGATTACAAGAGGATGGTGCCGAATCAGTAGGGGTATTATGGTCTTTTCACATTATTGGGAACTATAAATTGCGGTCGGACCCCGACTATCAAGT
TTACCCGCTGATAACAACCAGAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTGTTTCCCCATTGGGAACACCGGCTA
GGTTACTGTGGAGTACCAGCTTCTTCCGCCACAAGCTCATGATTTTTTAA
Protein sequenceShow/hide protein sequence
YGKIPRLQEDGAESVGVLWSFHIIGNYKLRSDPDYQVYPLITTREVFETDEELGNNRAGGVMGFCVSPLGTPARLLWSTSFFRHKLMIF