; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04462 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04462
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal RNA-processing protein 8
Genome locationCarg_Chr04:20309514..20312974
RNA-Seq ExpressionCarg04462
SyntenyCarg04462
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007823 - Ribosomal RNA processing protein 8
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR042036 - Ribosomal RNA-processing protein 8, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602415.1 Ribosomal RNA-processing protein 8, partial [Cucurbita argyrosperma subsp. sororia]6.3e-14187.63Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFM+ADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                       KTPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

KAG7033091.1 Ribosomal RNA-processing protein 8 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-168100Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

XP_022923770.1 ribosomal RNA-processing protein 8-like [Cucurbita moschata]5.0e-13886.96Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MV EGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLS SSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                       KTPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

XP_022991034.1 ribosomal RNA-processing protein 8-like [Cucurbita maxima]4.5e-13986.96Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                        TPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

XP_023553583.1 ribosomal RNA-processing protein 8-like [Cucurbita pepo subsp. pepo]5.0e-13886.62Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MVGEGRSSKKRKRAMRRGADK+QDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                        TPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKIST KAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

TrEMBL top hitse value%identityAlignment
A0A1S3C8U7 Ribosomal RNA-processing protein 82.3e-12575.16Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFD
        M  EGRSSKKRKRA RRG DKN               QDIVVS SSD  K+QR+SGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEAL+YFKED++LFD
Subjt:  MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFD

Query:  VVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISC
        +  +         YQEQM+HWPELPVNLIIKWLKEHDPSF+VADFGCGDARL+KNVKNKVFSFDLVSKDPSV+ACDMS                      
Subjt:  VVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISC

Query:  MKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA
          TPLDS+SVDVAVFCLSLMG+NY SYLAEA+RVLKP GWLLI+EVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILLYFKKKDEK S GK 
Subjt:  MKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA

Query:  IDWPQLKPCLYKRR
        IDWPQLKPCLYKRR
Subjt:  IDWPQLKPCLYKRR

A0A5A7T472 Ribosomal RNA-processing protein 82.3e-12575.16Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFD
        M  EGRSSKKRKRA RRG DKN               QDIVVS SSD  K+QR+SGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEAL+YFKED++LFD
Subjt:  MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFD

Query:  VVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISC
        +  +         YQEQM+HWPELPVNLIIKWLKEHDPSF+VADFGCGDARL+KNVKNKVFSFDLVSKDPSV+ACDMS                      
Subjt:  VVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISC

Query:  MKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA
          TPLDS+SVDVAVFCLSLMG+NY SYLAEA+RVLKP GWLLI+EVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILLYFKKKDEK S GK 
Subjt:  MKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA

Query:  IDWPQLKPCLYKRR
        IDWPQLKPCLYKRR
Subjt:  IDWPQLKPCLYKRR

A0A6J1C2A0 Ribosomal RNA-processing protein 82.3e-12575.24Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKN----------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLF
        M  EGRSS+KRKRA RRG DKN                +DIVVSGSS   K QR+SGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEAL+YFKEDQVLF
Subjt:  MVGEGRSSKKRKRAMRRGADKN----------------QDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLF

Query:  DVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCIS
        DV  +         YQEQMSHWPE PVNLIIKWLKEHDPSF+VADFGCGDARLAKNVKNKVFSFDLVSKDPSV+ACDMS                     
Subjt:  DVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCIS

Query:  CMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGK
           TPLDSSSVDVAVFCLSLMG+NYESYLAEA+RVLKP GWLLI+EVKSRFDPSNGGADPKKFIKAVC+LGFVSALKDFSNKMFILLYFKKKDEKI  GK
Subjt:  CMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGK

Query:  AIDWPQLKPCLYKRR
         +DWP+LKPCLYKRR
Subjt:  AIDWPQLKPCLYKRR

A0A6J1ECU8 Ribosomal RNA-processing protein 82.4e-13886.96Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MV EGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLS SSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                       KTPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

A0A6J1JTN8 Ribosomal RNA-processing protein 82.2e-13986.96Show/hide
Query:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ
        MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDV  +         YQ
Subjt:  MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQ

Query:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF
        EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS                        TPLDSSSVDVAVF
Subjt:  EQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVF

Query:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        CLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Subjt:  CLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

SwissProt top hitse value%identityAlignment
O43159 Ribosomal RNA-processing protein 86.7e-4542.29Show/hide
Query:  KMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFS
        +M  RL G  FR LNE+LY+     A   F+ED   F         L  + +Q Q+  WP  PV+ I + L++   S +VADFGCGD RLA +++N V  
Subjt:  KMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFS

Query:  FDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKF
        FDL S DP V  CDM++V                       PL+  SVDVAVFCLSLMG N   +L EA RVLKP G L +AEV SRF+      D + F
Subjt:  FDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKF

Query:  IKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA-IDWPQLKPCLYKRR
        ++AV +LGF    KD +N  F L  F+K    +   KA +   QL+PCLYKRR
Subjt:  IKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKA-IDWPQLKPCLYKRR

O44410 Ribosomal RNA-processing protein 82.2e-4036.24Show/hide
Query:  SSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLD---KMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQM
        + KKRKR  ++   K +   V+G +   ++  ++ +    D   + + RL  G FR LNEKLYTCTG EA  +FKED   FD        L  K + +Q+
Subjt:  SSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLD---KMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQM

Query:  SHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNV--KNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFC
          WP  P+  II+WL+       V D GCG+A++A+ V  K+K+ SFDLV+ +  V +CDMSK+                       P + SS D+ ++C
Subjt:  SHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNV--KNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFC

Query:  LSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        LSLMG N   ++ EA+RVLK  G L IAEV SRF         K+F +A+ ++GF  + +      F+++ FKK  EK+   +     +LKPCLYK+R
Subjt:  LSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

Q5U4F0 Ribosomal RNA-processing protein 86.9e-4237.09Show/hide
Query:  RSSKKRKRAMRRGADKNQDIVVSGSSD------APKS-QRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKR
        + +K+R +   R  +    + +  S +      APKS  + + + +   +M  RL G  FR LNE+LY+     A   F+ED   F         L  + 
Subjt:  RSSKKRKRAMRRGADKNQDIVVSGSSD------APKS-QRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKR

Query:  YQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVA
        +Q Q+  WP  PV+ I K L++   S +VADFGCGD RLA +V+N V  FDL + DP V  CDM++V                       PL+  SVDVA
Subjt:  YQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVA

Query:  VFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKK-DEKISTGKAIDWPQLKPCLYK
        VFCLSLMG N   +L EA RVLKP G L +AEV SRF+      D + F+ AV +LGF    KD +N  F L  F+K    ++     +   +L+PCLYK
Subjt:  VFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKK-DEKISTGKAIDWPQLKPCLYK

Query:  RR
         R
Subjt:  RR

Q84JC0 Ribosomal RNA-processing protein 81.4e-9062.37Show/hide
Query:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE
        KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED  +FD+  +         YQ+QMS+WPELPVN II WL  
Subjt:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE

Query:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL
        +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSV+ACDMS                        T L+SSSVDVAVFCLSLMG NY SY+ EA RVL
Subjt:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL

Query:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        +PSG LLIAEVKSRFDP+NGGADPK F+KAVC+LGF S LKDFSNKMFIL +FKKK++  S  K I WP+LK CLYKRR
Subjt:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

Q9DB85 Ribosomal RNA-processing protein 81.1e-4240.67Show/hide
Query:  PKS-QRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGC
        PKS  + S + +   +M  RL G  FR LNE+LY+     A   F+ED   F         L  + +Q Q+  WP  PV+ I K L++   S +VADFGC
Subjt:  PKS-QRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKEHDPSFMVADFGC

Query:  GDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVK
        GD RLA +V+N V  FDL S DP V  CDM++V                       PL+  SVDVAVFCLSLMG N   +L EA RVLK  G L +AEV 
Subjt:  GDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVK

Query:  SRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKK-DEKISTGKAIDWPQLKPCLYKRR
        SRF+      D + F+ AV +LGF    KD +N  F L  F+K    ++     +   +L+PCLYKRR
Subjt:  SRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKK-DEKISTGKAIDWPQLKPCLYKRR

Arabidopsis top hitse value%identityAlignment
AT5G40530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein9.8e-9262.37Show/hide
Query:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE
        KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED  +FD+  +         YQ+QMS+WPELPVN II WL  
Subjt:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE

Query:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL
        +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSV+ACDMS                        T L+SSSVDVAVFCLSLMG NY SY+ EA RVL
Subjt:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL

Query:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
        +PSG LLIAEVKSRFDP+NGGADPK F+KAVC+LGF S LKDFSNKMFIL +FKKK++  S  K I WP+LK CLYKRR
Subjt:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR

AT5G40530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein5.6e-7957.71Show/hide
Query:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE
        KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED  +FD+  +         YQ+QMS+WPELPVN II WL  
Subjt:  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE

Query:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL
        +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSV+ACDMS                        T L+SSSVDVAVFCLSLMG NY SY+ EA RVL
Subjt:  HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL

Query:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALK-----------------------DFSNKMFILLYFKKK
        +PSG LLIAEVKSRFDP+NGGADPK F+KAVC+LGF S LK                       DFSNKMFIL +FKKK
Subjt:  KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALK-----------------------DFSNKMFILLYFKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGGGAGGGCCGCTCAAGCAAAAAGCGCAAGAGGGCGATGCGTCGTGGAGCAGACAAAAACCAAGACATCGTTGTTTCTGGTTCTTCCGACGCCCCAAAATCTCA
GAGGCTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACAGGGGAAGAGGCGC
TTAGTTATTTCAAAGAAGACCAGGTTCTGTTTGATGTTGTAAGTTCTGCCCGTCTGTTCTTGCTTCCTAAACGATACCAAGAGCAAATGTCGCATTGGCCTGAGCTGCCT
GTGAATTTAATCATAAAATGGCTGAAAGAGCACGATCCTTCATTTATGGTAGCTGATTTTGGCTGTGGGGATGCACGCCTTGCTAAAAATGTGAAGAATAAAGTTTTCTC
GTTTGATCTGGTTTCCAAAGATCCTTCTGTTGTTGCTTGTGATATGTCAAAAGTGCGCACTCTATTTGAACTTATTGTCATCAGATGCATTGAGACATATAACTGCATTT
CATGCATGAAAACACCTCTGGACTCTTCATCTGTGGATGTTGCTGTGTTTTGTCTTTCACTTATGGGGATCAATTATGAAAGTTACTTGGCAGAAGCACAAAGAGTACTT
AAACCAAGTGGATGGCTTCTAATAGCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGATCCCAAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTTGT
CTCAGCTTTGAAGGACTTCTCAAACAAGATGTTTATCTTGTTATACTTCAAGAAAAAGGATGAGAAAATTTCAACAGGGAAAGCCATCGATTGGCCACAGCTAAAACCTT
GTTTATACAAACGTCGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTGATTTCTTTCATCCAATAATTTATTTCACTTCAAGCAAAAGTTTAGGTCCGTCCAGGGTGAAAATTAGCACCAACTGAAACAAAAAAACCGAACCAGATCAGAGACG
GTTTGTTCCATTAAATAAACCGAATGCAGTCGGTTCGGATCAGTTTTACTTCCATAGAATCAACTATTAACCGAACCGAACCGAACTTTCGGCCTCCCTTGAGGCGGGTT
TTGCTGAACTCCTAACACAACGCGCGCGCCCTAGTTCCAGTTACAGCATTCGTTCTGCTTCGCTCTTTTCGATCTCCCCTCTTCTCAACGCGAGTTTGTTCTTCAAGGTT
TCCTCGTACAACAATGGTGGGGGAGGGCCGCTCAAGCAAAAAGCGCAAGAGGGCGATGCGTCGTGGAGCAGACAAAAACCAAGACATCGTTGTTTCTGGTTCTTCCGACG
CCCCAAAATCTCAGAGGCTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACA
GGGGAAGAGGCGCTTAGTTATTTCAAAGAAGACCAGGTTCTGTTTGATGTTGTAAGTTCTGCCCGTCTGTTCTTGCTTCCTAAACGATACCAAGAGCAAATGTCGCATTG
GCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCACGATCCTTCATTTATGGTAGCTGATTTTGGCTGTGGGGATGCACGCCTTGCTAAAAATGTGAAGA
ATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCTGTTGTTGCTTGTGATATGTCAAAAGTGCGCACTCTATTTGAACTTATTGTCATCAGATGCATTGAGACA
TATAACTGCATTTCATGCATGAAAACACCTCTGGACTCTTCATCTGTGGATGTTGCTGTGTTTTGTCTTTCACTTATGGGGATCAATTATGAAAGTTACTTGGCAGAAGC
ACAAAGAGTACTTAAACCAAGTGGATGGCTTCTAATAGCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGATCCCAAAAAGTTCATAAAGGCTGTTTGTG
AGCTAGGTTTTGTCTCAGCTTTGAAGGACTTCTCAAACAAGATGTTTATCTTGTTATACTTCAAGAAAAAGGATGAGAAAATTTCAACAGGGAAAGCCATCGATTGGCCA
CAGCTAAAACCTTGTTTATACAAACGTCGCTGA
Protein sequenceShow/hide protein sequence
MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELP
VNLIIKWLKEHDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETYNCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVL
KPSGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR