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Carg04502 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04502
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEndoplasmic reticulum transmembrane protein
Genome locationCarg_Chr04:20121077..20121883
RNA-Seq ExpressionCarg04502
SyntenyCarg04502
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008417 - B-cell receptor-associated protein 29/31


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033051.1 hypothetical protein SDJN02_07104 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-57100Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
        VLIIDRIHNYIRELHRLRTNLEARSEART
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

XP_008458888.1 PREDICTED: uncharacterized protein LOC103498158 [Cucumis melo]5.6e-3876.23Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI+VV  LVL EMALIL LLF+ P R LI+ GLDRLKQGRGPLV ++VAATMLV+FAS LYNAA IR R AE G L+QTDE+LMA+RLLE   IGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         LIIDRIHNYIRELHRLRT LE
Subjt:  VLIIDRIHNYIRELHRLRTNLE

XP_011655362.1 uncharacterized protein LOC101213037 isoform X1 [Cucumis sativus]1.5e-3872.87Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI+V   LVL EMALIL LLF+ P R LI+ GLDRLKQGRGPLVV++VAATMLV+FAS LYNAA I RR AEAG L+QTDE+L+A+RLLE   IGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
         LIIDRIHNYIRELHRLR  LE R +  T
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

XP_022954156.1 uncharacterized protein LOC111456500 isoform X1 [Cucurbita moschata]2.7e-5698.45Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVV+TVAATMLVLFASTLYNAAEI RRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
        VLIIDRIHNYIRELHRLRTNLEARSEART
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

XP_022990643.1 uncharacterized protein LOC111487467 isoform X1 [Cucurbita maxima]1.6e-5698.45Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPL+V+TVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
        VLIIDRIHNYIRELHRLRTNLEARSEART
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

TrEMBL top hitse value%identityAlignment
A0A0A0KNS5 Endoplasmic reticulum transmembrane protein7.2e-3972.87Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI+V   LVL EMALIL LLF+ P R LI+ GLDRLKQGRGPLVV++VAATMLV+FAS LYNAA I RR AEAG L+QTDE+L+A+RLLE   IGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
         LIIDRIHNYIRELHRLR  LE R +  T
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

A0A1S3C8X1 Endoplasmic reticulum transmembrane protein2.7e-3876.23Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI+VV  LVL EMALIL LLF+ P R LI+ GLDRLKQGRGPLV ++VAATMLV+FAS LYNAA IR R AE G L+QTDE+LMA+RLLE   IGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         LIIDRIHNYIRELHRLRT LE
Subjt:  VLIIDRIHNYIRELHRLRTNLE

A0A498K5E5 Endoplasmic reticulum transmembrane protein4.1e-3466.39Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI ++F LVL EMALIL LLFRTP RKL+I GLDR KQGRGPLV ++V  T+LV F+ST+Y+   +++R +EAGF++ TDEVLMAHRLLEAS+IGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         +IIDR+H YI+ELH LR  +E
Subjt:  VLIIDRIHNYIRELHRLRTNLE

A0A6J1GQ35 Endoplasmic reticulum transmembrane protein1.3e-5698.45Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVV+TVAATMLVLFASTLYNAAEI RRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
        VLIIDRIHNYIRELHRLRTNLEARSEART
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

A0A6J1JTW1 Endoplasmic reticulum transmembrane protein7.6e-5798.45Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPL+V+TVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLEARSEART
        VLIIDRIHNYIRELHRLRTNLEARSEART
Subjt:  VLIIDRIHNYIRELHRLRTNLEARSEART

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11905.1 B-cell receptor-associated protein 31-like3.4e-2549.18Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        M +++F +VL E+ +I+ L F+TP RKL+I  LDR K+GRGP+V++TV+AT++VL  +++YN   I++R  E G ++ TDEV+MA  LLE++++G  LFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         L+IDR+H+Y+REL   R N+E
Subjt:  VLIIDRIHNYIRELHRLRTNLE

AT1G11905.2 B-cell receptor-associated protein 31-like4.3e-2045.08Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        M +++F +VL E+ +I+ L F+TP RKL+I  LDR K+GRGP+V++TV+AT++VL  +++YN   I++R  E G ++ TDEV+MA  LLE++++   L L
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         L++  +H+Y+REL   R N+E
Subjt:  VLIIDRIHNYIRELHRLRTNLE

AT3G20450.1 B-cell receptor-associated protein 31-like2.4e-2349.59Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEA-GFLSQTDEVLMAHRLLEASMIGFSLF
        M +++F +V  E  LIL L F TP R++++  LD  KQGR PLV +TVAATMLVLF S +++  +I  R +E+ G  + TD+V+ A+RLLEA ++G  LF
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEA-GFLSQTDEVLMAHRLLEASMIGFSLF

Query:  LVLIIDRIHNYIRELHRLRTNLE
        L ++IDR+H Y REL   R NLE
Subjt:  LVLIIDRIHNYIRELHRLRTNLE

AT5G42570.1 B-cell receptor-associated 31-like4.3e-2851.64Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL
        MI +++ ++  EMALIL+LLF+TP RKLII   DR+K+GRGP+VV+T+  T+ V+  S++Y+   I+RR+ +   L+ TD+VL +  LLEAS++GF LFL
Subjt:  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFL

Query:  VLIIDRIHNYIRELHRLRTNLE
         L+IDR+H+YIREL  LR  +E
Subjt:  VLIIDRIHNYIRELHRLRTNLE

AT5G48660.1 B-cell receptor-associated protein 31-like4.8e-1941.73Show/hide
Query:  MIRVVFNLVLTEMALILVLLFRT-PFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLF
        MI+++F ++  E A+  +LL +  P R+L+I  LD++K G+GP  V+T+A TM V+  S L +  +I+ + A+ G +S  D+VL    LLEAS++G  LF
Subjt:  MIRVVFNLVLTEMALILVLLFRT-PFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLF

Query:  LVLIIDRIHNYIRELHRLRTNLEARSE
        L  IIDR+H+Y+R+L  LR+N+ +  E
Subjt:  LVLIIDRIHNYIRELHRLRTNLEARSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGAGTGGTGTTCAACCTGGTATTGACCGAGATGGCCTTGATTTTGGTTTTACTGTTCAGAACTCCATTCAGAAAGCTCATAATCAGTGGATTGGACAGATTGAA
GCAGGGGAGAGGGCCTTTGGTGGTGAGAACCGTTGCCGCCACCATGCTGGTGCTCTTCGCCTCAACTCTCTACAATGCGGCGGAAATCCGCCGGCGAACGGCGGAGGCCG
GCTTCCTCAGCCAGACCGACGAGGTTCTCATGGCTCATCGCCTTCTCGAAGCCTCCATGATCGGATTCTCGCTATTCCTCGTGCTGATTATAGACAGAATACATAATTAC
ATCAGAGAGCTTCATCGACTTAGAACCAATTTGGAAGCAAGATCTGAAGCACGCACATGA
mRNA sequenceShow/hide mRNA sequence
CCATTTAAAAACCGAAACTTTGAAAAAAAGAAAAAATTAAGGGACATTAGAGATGATTCGAGTGGTGTTCAACCTGGTATTGACCGAGATGGCCTTGATTTTGGTTTTAC
TGTTCAGAACTCCATTCAGAAAGCTCATAATCAGTGGATTGGACAGATTGAAGCAGGGGAGAGGGCCTTTGGTGGTGAGAACCGTTGCCGCCACCATGCTGGTGCTCTTC
GCCTCAACTCTCTACAATGCGGCGGAAATCCGCCGGCGAACGGCGGAGGCCGGCTTCCTCAGCCAGACCGACGAGGTTCTCATGGCTCATCGCCTTCTCGAAGCCTCCAT
GATCGGATTCTCGCTATTCCTCGTGCTGATTATAGACAGAATACATAATTACATCAGAGAGCTTCATCGACTTAGAACCAATTTGGAAGCAAGATCTGAAGCACGCACAT
GAAAAACATCGAAAAATCTGAAATTTATTTTAACTTTGTTTTCTATTATCTGTAAATGCAATATATTACATAATATTGAATATACCAATTAATTATTTTCACATAAAAAA
ACTCAATTATAATTAATTATAATTTCAAAATACTCTAAAAAAGGCCTATATGATGCCTCATTGGGCTCAACGTTTGGGCCACGATGTTATTGGGCTATGTAGAGAAAGCC
CAATAAGCAAACGAAAATGTAAAATCGCTCTCCTGAAAAAAGGAAAAATAATT
Protein sequenceShow/hide protein sequence
MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTLYNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIGFSLFLVLIIDRIHNY
IRELHRLRTNLEARSEART