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Carg04538 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04538
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein IQ-DOMAIN 1-like
Genome locationCarg_Chr04:19888638..19888871
RNA-Seq ExpressionCarg04538
SyntenyCarg04538
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602332.1 Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-31100Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

KAG7033016.1 hypothetical protein SDJN02_07068, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-31100Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

XP_022921454.1 protein IQ-DOMAIN 1-like [Cucurbita moschata]1.4e-31100Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

XP_022990335.1 protein IQ-DOMAIN 1-like [Cucurbita maxima]1.2e-3098.7Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKE VSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

XP_023513229.1 protein IQ-DOMAIN 1-like [Cucurbita pepo subsp. pepo]1.2e-3098.7Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKE VSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

TrEMBL top hitse value%identityAlignment
A0A6J1C0I9 protein IQ-DOMAIN 1-like9.3e-1874.68Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTAS--TATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMG EKT  TPEK   +GGAKKRLS+ AS  TAT RRHSGPPKIDA+PIK V    +D+TGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTAS--TATVRRHSGPPKIDATPIKNVAATERDFTGESR

A0A6J1E0I5 protein IQ-DOMAIN 1-like6.6e-32100Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

A0A6J1FFI1 protein IQ-DOMAIN 1-like1.8e-2177.92Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMG E T ATP+K P SGG KKRLSF AS A  RRHSGPPK+D  PIKNVA  +RDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

A0A6J1JPU1 protein IQ-DOMAIN 1-like5.6e-3198.7Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
        MASTEAARARSRLSSPMGIEKTTATPEKE VSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR

A0A6J1K263 protein IQ-DOMAIN 1-like6.9e-2177.63Show/hide
Query:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGES
        MASTEAARARSRLSSPMG E T ATP+K P SGG KKRLSF AS A  RRHSGPPK+D  PIKNVA  ERDFTGE+
Subjt:  MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGES

SwissProt top hitse value%identityAlignment
Q9FT53 Protein IQ-DOMAIN 35.1e-0549.23Show/hide
Query:  MASTEAARARSRLS--SPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIK
        MA T+AA+AR+R S  SP+  EKT            AKKRLSF+ S  TVRR SGPPK+++   K
Subjt:  MASTEAARARSRLS--SPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIK

Arabidopsis top hitse value%identityAlignment
AT3G52290.1 IQ-domain 33.6e-0649.23Show/hide
Query:  MASTEAARARSRLS--SPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIK
        MA T+AA+AR+R S  SP+  EKT            AKKRLSF+ S  TVRR SGPPK+++   K
Subjt:  MASTEAARARSRLS--SPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACAGAAGCAGCTAGGGCTAGGTCCCGCTTGTCGAGTCCGATGGGAATAGAGAAGACGACAGCAACTCCGGAGAAAGAACCGGTGAGTGGCGGCGCAAAGAA
GCGGCTCTCATTCACCGCCTCGACGGCGACGGTGAGGAGACACTCTGGTCCACCGAAAATAGACGCTACTCCGATCAAGAATGTTGCAGCGACAGAGAGAGATTTTACCG
GCGAGAGCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACAGAAGCAGCTAGGGCTAGGTCCCGCTTGTCGAGTCCGATGGGAATAGAGAAGACGACAGCAACTCCGGAGAAAGAACCGGTGAGTGGCGGCGCAAAGAA
GCGGCTCTCATTCACCGCCTCGACGGCGACGGTGAGGAGACACTCTGGTCCACCGAAAATAGACGCTACTCCGATCAAGAATGTTGCAGCGACAGAGAGAGATTTTACCG
GCGAGAGCAGATAG
Protein sequenceShow/hide protein sequence
MASTEAARARSRLSSPMGIEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR