; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04550 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04550
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCarg_Chr04:19815225..19817268
RNA-Seq ExpressionCarg04550
SyntenyCarg04550
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033004.1 Chlorophyll a-b binding protein 6A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-144100Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]1.1e-13394.07Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GIATTAFPSVLSSSKSKFA GVPISGV+VNASSRFSMSA+WMPGQPRPPYLDGSAPG       DFGFDPL LGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG+LVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+PEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]1.8e-13393.68Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GIATTAFPSVLSSSKSKFA  VPISGV+VNASSRFSMS++WMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG+LVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+PEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_022921712.1 chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita moschata]5.5e-13897.23Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

XP_022990443.1 chlorophyll a-b binding protein 6A, chloroplastic-like [Cucurbita maxima]1.2e-13796.84Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+NPEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic5.2e-13494.07Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GIATTAFPSVLSSSKSKFA GVPISGV+VNASSRFSMSA+WMPGQPRPPYLDGSAPG       DFGFDPL LGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG+LVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+PEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic8.8e-13493.68Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GIATTAFPSVLSSSKSKFA  VPISGV+VNASSRFSMS++WMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG+LVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+PEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic8.8e-13493.68Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GIATTAFPSVLSSSKSKFA  VPISGV+VNASSRFSMS++WMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG+LVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+PEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A6J1E190 Chlorophyll a-b binding protein, chloroplastic2.7e-13897.23Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

A0A6J1JTA7 Chlorophyll a-b binding protein, chloroplastic5.9e-13896.84Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPG       DFGFDPLRLGEVPENLERFKESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS+NPEKLKEYKVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic1.4e-11581.82Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC
        MASNTLMS GI     PS LSS+KSKFA  +P+   + N  SRFSMSADWMPGQPRP YLDGSAPG       DFGFD L LGEVP NLER+KESELIHC
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHC

Query:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE
        RWAMLAVPG++VPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYSK+P K +E KVKE
Subjt:  RWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKE

Query:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP
        IKNGRLALLA VGFCVQQSAY GTGPLENLATHLADPWHNNIGD+IIP+ I P
Subjt:  IKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP

Q01667 Chlorophyll a-b binding protein 6, chloroplastic3.7e-11381.53Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH
        MASN+LMS GIA   +PS+LSSSKSKF + GVP+   +     R  M+A WMPG+PRP YLDGSAPG       DFGFDPL LGEVP NLER+KESELIH
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH

Query:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK
        CRWAMLAVPG+LVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+P+KL+E KVK
Subjt:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK

Query:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.1e-3539.33Show/hide
Query:  WMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLA
        W PG   P +LDGS  G       D+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA
Subjt:  WMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLA

Query:  VPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKNPEKLKEYKVKEIKNGR
          G L  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + +PEK  + ++ EIK+ R
Subjt:  VPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKNPEKLKEYKVKEIKNGR

Query:  LALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        LA++AF+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  LALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic8.6e-10274.89Show/hide
Query:  PSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEAL
        PS+L+ S     +G+P    +   S R +MSA+W PGQPRP +LDGS+PG       DFGFDPL L  VPEN ERFKESE+ HCRWAML VPG+LVPEAL
Subjt:  PSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEAL

Query:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKEIKNGRLALLAFVGFCV
        GLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SK+P K +E K+KEIKNGRLA+LAFVGFCV
Subjt:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKEIKNGRLALLAFVGFCV

Query:  QQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTI
        QQSAYPGTGPLENLATHLADPWHNNIGDI+IPR I
Subjt:  QQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTI

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic8.2e-3639.51Show/hide
Query:  LSSSKSKFATGVPISGVSVNASSRFSMSA---DWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEAL
        L  S  K   GV    V  + S+ F + A   +W+PG   P YL GS PG       D GFDPL L E PENL  F ++EL++ RWAML V GML+PE  
Subjt:  LSSSKSKFATGVPISGVSVNASSRFSMSA---DWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEAL

Query:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQR--------SMEKDPEKKK---------YPGGAFDPLGYSKNPEKLKEYKVK
             +   +W A   G+  Y      + +  T+ VIEF+   +VE +R        S+ +DP  K+         YPGG F+PL ++       E K K
Subjt:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQR--------SMEKDPEKKK---------YPGGAFDPLGYSKNPEKLKEYKVK

Query:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI
        EI NGRLA+LAF+GF +Q +   G GP +NL  H++DPWHN I
Subjt:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI

Arabidopsis top hitse value%identityAlignment
AT3G54890.1 photosystem I light harvesting complex gene 12.6e-11481.53Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH
        MASN+LMS GIA   +PS+LSSSKSKF + GVP+   +     R  M+A WMPG+PRP YLDGSAPG       DFGFDPL LGEVP NLER+KESELIH
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH

Query:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK
        CRWAMLAVPG+LVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+P+KL+E KVK
Subjt:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK

Query:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.2 photosystem I light harvesting complex gene 13.8e-8969.08Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH
        MASN+LMS GIA   +PS+LSSSKSKF + GVP+   +     R  M+A WMPG+PRP YLDGSAPG       DFGFDPL LGEVP NLER+KESELIH
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH

Query:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK
        CRWAMLAVPG+LVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                                  E KVK
Subjt:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK

Query:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP
        EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+IP
Subjt:  EIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIP

AT3G54890.3 photosystem I light harvesting complex gene 12.4e-5974.05Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH
        MASN+LMS GIA   +PS+LSSSKSKF + GVP+   +     R  M+A WMPG+PRP YLDGSAPG       DFGFDPL LGEVP NLER+KESELIH
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH

Query:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA
        CRWAMLAVPG+LVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 12.3e-8677.67Show/hide
Query:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH
        MASN+LMS GIA   +PS+LSSSKSKF + GVP+   +     R  M+A WMPG+PRP YLDGSAPG       DFGFDPL LGEVP NLER+KESELIH
Subjt:  MASNTLMSFGIATTAFPSVLSSSKSKF-ATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIH

Query:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK
        CRWAMLAVPG+LVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK+P+KL+E KVK
Subjt:  CRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVK

Query:  EIKNGR
        EIKNG+
Subjt:  EIKNGR

AT5G01530.1 light harvesting complex photosystem II7.6e-3739.33Show/hide
Query:  WMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLA
        W PG   P +LDGS  G       D+GFDP  LG+  E                                            ++RF+E ELIH RWAMLA
Subjt:  WMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPE-------------------------------------------NLERFKESELIHCRWAMLA

Query:  VPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKNPEKLKEYKVKEIKNGR
          G L  E L    W  A +   + G  ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + +PEK  + ++ EIK+ R
Subjt:  VPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKNPEKLKEYKVKEIKNGR

Query:  LALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD
        LA++AF+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  LALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACATTGATGAGCTTCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAATTCGCCACCGGTGTCCCGATTTCCGGCGTCTC
CGTTAATGCTTCCTCTCGATTTTCCATGTCCGCTGACTGGATGCCTGGCCAGCCCCGCCCACCGTACCTTGACGGCTCTGCCCCCGGATGTGTGGTTGTGTTCAACAGTG
ATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTACCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATG
TTGGTACCTGAGGCGTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCTATTCCAGGAGGCCAAGCTACCTACCTGGGGCAACCAGTCCCATGGGGAACTTT
GCCAACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAAGACCCAGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGACCCAT
TGGGCTACTCCAAAAACCCTGAAAAGCTGAAGGAATACAAAGTCAAGGAGATCAAAAATGGTCGGTTGGCGTTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCA
TACCCAGGAACAGGGCCACTCGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGAACGATTTCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
CCATTCCCACTCTCTCTTCAATCTCTGCCACTGTTTTTCAATGGCTTCCAACACATTGATGAGCTTCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCA
AGTCTAAATTCGCCACCGGTGTCCCGATTTCCGGCGTCTCCGTTAATGCTTCCTCTCGATTTTCCATGTCCGCTGACTGGATGCCTGGCCAGCCCCGCCCACCGTACCTT
GACGGCTCTGCCCCCGGATGTGTGGTTGTGTTCAACAGTGATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTACCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCT
AATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATGTTGGTACCTGAGGCGTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCTATTCCAGGAGGCC
AAGCTACCTACCTGGGGCAACCAGTCCCATGGGGAACTTTGCCAACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAAGAC
CCAGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGACCCATTGGGCTACTCCAAAAACCCTGAAAAGCTGAAGGAATACAAAGTCAAGGAGATCAAAAATGGTCGGTTGGC
GTTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCACTCGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCG
ACATCATCATCCCCAGAACGATTTCCCCTTGAATTTTGTCTTAAATCATACCAAATGTAATTAAATTTCTCCCTGTCCTGAATCTGAACTCGATGGTTTTCCCTCCCTTT
GCGGCTATGAATGTGCTCTGTATCTTGATATTGCCCCTCATTTCAGTGCATCAAGTTACCATTGGAGGAAAAATGAAGCATCATTTAGCATAAGACTCCATTATTTGTTT
TATTCACCACTAGTTTGCCCTTACCTATTTGTGCTCGAGCCTCTCCTTCACCTCGTAAACTCAGCACCTATTTGTTTAAGTCTCTCTATCATTTAAACCGGGCTCTTGAA
ATAATCTCCACACACCCTTCTGCCTCGAATGCTCAGCTAAAACTTCAAACCAAAAATCATAACTAATAGTTAATAATTCCATTAGGATTTTATCATCAATCTCTAATTGG
GCTAGTCATTGCAAGCCTGTAAAACACAATGGTGGACTTCGGCCCAATCTGATTAACAAGCAAGTGGTGGTGTGAGCCCAATAGATCATTACACTCCATTGGGCTAAAGG
CCCATAAACCTGGACAAGAAAGCCCAAATAAACGGGCCCATTGAATGATGAAAATTGACTAAATTAAATAGGTAGAAGTTTCATATATATATATATATA
Protein sequenceShow/hide protein sequence
MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGCVVVFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGM
LVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKEIKNGRLALLAFVGFCVQQSA
YPGTGPLENLATHLADPWHNNIGDIIIPRTISP