CuGenDBv2

Gene ID	Carg04559
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin family protein
Genome location	Carg_Chr04:19763129..19763503
RNA-Seq Expression	Carg04559
Synteny	Carg04559
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0006464 - cellular protein modification process (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0005515 - protein binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0031386 - protein tag (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR029071 - Ubiquitin-like domain superfamily IPR039732 - Ubiquitin-like modifier Hub1/Ubl5

Homology

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GenBank top hits

e value

%identity

Alignment

CAA7058928.1 unnamed protein product [Microthlaspi erraticum]

4.0e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

XP_002863802.1 ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata]

4.0e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

XP_008785280.1 ubiquitin-like protein 5 [Phoenix dactylifera]

4.0e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT+AEKIRIQKWYNIYKDHITLRDYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

XP_017249268.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus]

4.0e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

XP_022922324.1 ubiquitin-like protein 5 [Cucurbita moschata]

1.4e-33

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C3F9 ubiquitin-like protein 5

1.9e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

A0A398AR32 Ubiquitin-like domain-containing protein

1.9e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

A0A6J1E2Y4 ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

A0A6J1I1R2 ubiquitin-like protein 5

1.9e-33

97.26

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

A0A6J1JQA2 ubiquitin-like protein 5

6.7e-34

100

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

SwissProt top hits

e value

%identity

Alignment

Q3T0Z3 Ubiquitin-like protein 5

5.3e-28

79.17

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYE+HDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 5

5.3e-28

79.17

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYE+HDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 5

5.3e-28

79.17

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYE+HDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 5

5.3e-28

79.17

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYE+HDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 5

1.2e-35

95.89

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

Arabidopsis top hits

e value

%identity

Alignment

AT3G45180.1 Ubiquitin-like superfamily protein

2.1e-35

93.15

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI L+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

AT5G42300.1 ubiquitin-like protein 5

8.3e-37

95.89

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Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DYE+HDGMGLELYYN
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

Sequences

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CDS sequence

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ATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGAC
TAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATT
AA

mRNA sequence

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ACGCCATTGACCCGGGTTTTCCATGGCGGTAGAAATATATTATAAAATATGAACGCGAACTAAAATTCTCTCATTATTTTGGAATTCTGCTCTGTTGAACTCTGAGACGA
CCTAGGGTTTTACTTTCTTGAGGGGAAGAAGAAGAAGAAGAAGATGATCGAGGTGGTGCTGAACGATCGGCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACA
CCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGAT
TACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAA

Protein sequence

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MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN

Carg04559 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome