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Carg04570 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04570
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionamino acid transporter AVT1C-like
Genome locationCarg_Chr04:19689745..19690788
RNA-Seq ExpressionCarg04570
SyntenyCarg04570
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602303.1 Amino acid transporter AVT1C, partial [Cucurbita argyrosperma subsp. sororia]1.3e-22100Show/hide
Query:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
Subjt:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
KAG7032984.1 Amino acid transporter AVT1B, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-73100Show/hide
Query:  MSEIIKNIHEKNRNKGESTEGRGTTDRQSSRFSLPRVRDLCEIERDFASLRELRIDLKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGE
        MSEIIKNIHEKNRNKGESTEGRGTTDRQSSRFSLPRVRDLCEIERDFASLRELRIDLKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGE
Subjt:  MSEIIKNIHEKNRNKGESTEGRGTTDRQSSRFSLPRVRDLCEIERDFASLRELRIDLKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGE

Query:  DNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLLRLIVRLE
        DNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLLRLIVRLE
Subjt:  DNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLLRLIVRLE
XP_022958197.1 amino acid transporter AVT1C-like isoform X1 [Cucurbita moschata]7.9e-3198.72Show/hide
Query:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        LKERI TRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
Subjt:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
XP_022958205.1 amino acid transporter AVT1C-like isoform X2 [Cucurbita moschata]7.9e-3198.72Show/hide
Query:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        LKERI TRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
Subjt:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
XP_023539600.1 amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo]6.7e-3096.15Show/hide
Query:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        LKERI TRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGED+GNESDSSGLSMNNQNHKQSSSYNTAAWP+SYR
Subjt:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
TrEMBL top hitse value%identityAlignment
A0A5A7T108 Vacuolar amino acid transporter 1-like9.1e-1777.03Show/hide
Query:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLL
        MKNSVSDRSFYIESSDDEDLEKE+DN  D+GNESDSSG S +NQNH Q SSY TAAWP+SYRF  + SS+S LL
Subjt:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLL
A0A6J1H171 amino acid transporter AVT1C-like isoform X13.8e-3198.72Show/hide
Query:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        LKERI TRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
Subjt:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
A0A6J1H2S5 amino acid transporter AVT1C-like isoform X23.8e-3198.72Show/hide
Query:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        LKERI TRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
Subjt:  LKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
A0A6J1JPR1 amino acid transporter AVT1C-like isoform X21.6e-2195.16Show/hide
Query:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        MKNSVSDRSFYIESSDDEDLEKELDNGED+GNESDSSGLSMNNQNHKQSSSYNT AWP+SYR
Subjt:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
A0A6J1JRP7 amino acid transporter AVT1C-like isoform X11.6e-2195.16Show/hide
Query:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        MKNSVSDRSFYIESSDDEDLEKELDNGED+GNESDSSGLSMNNQNHKQSSSYNT AWP+SYR
Subjt:  MKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54830.1 Transmembrane amino acid transporter family protein1.0e-0446.03Show/hide
Query:  MKNSVSDRSFYIESSDDEDLEKEL-DNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR
        M +S SD+S YIES D +D  K L D+ +D+G  SD+S     NQ+H   +S  + AWP+SYR
Subjt:  MKNSVSDRSFYIESSDDEDLEKEL-DNGEDNGNESDSSGLSMNNQNHKQSSSYNTAAWPRSYR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAATTATAAAGAATATTCATGAGAAAAACAGAAATAAAGGGGAGTCCACAGAAGGAAGAGGAACCACGGATCGACAGAGTTCACGATTCTCTCTCCCCAGGGT
TCGTGATTTGTGTGAAATCGAACGTGATTTTGCCTCTTTACGTGAACTTCGGATTGACTTGAAGGAACGAATTACGACAAGGAGGAATTTGAATTTTGATAAGAAAATGA
AGAACTCTGTGTCGGATCGAAGTTTTTACATCGAAAGTTCAGACGACGAAGATCTAGAAAAGGAACTCGACAATGGCGAAGACAATGGAAACGAATCGGATTCTTCCGGC
TTATCGATGAATAATCAGAATCATAAACAATCAAGTTCTTACAATACCGCCGCTTGGCCTCGAAGTTACAGATTTTATCCTTCCATTTCTTCTGCTTCAAATCTCCTTCG
CCTAATAGTTAGATTAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAAATTATAAAGAATATTCATGAGAAAAACAGAAATAAAGGGGAGTCCACAGAAGGAAGAGGAACCACGGATCGACAGAGTTCACGATTCTCTCTCCCCAGGGT
TCGTGATTTGTGTGAAATCGAACGTGATTTTGCCTCTTTACGTGAACTTCGGATTGACTTGAAGGAACGAATTACGACAAGGAGGAATTTGAATTTTGATAAGAAAATGA
AGAACTCTGTGTCGGATCGAAGTTTTTACATCGAAAGTTCAGACGACGAAGATCTAGAAAAGGAACTCGACAATGGCGAAGACAATGGAAACGAATCGGATTCTTCCGGC
TTATCGATGAATAATCAGAATCATAAACAATCAAGTTCTTACAATACCGCCGCTTGGCCTCGAAGTTACAGATTTTATCCTTCCATTTCTTCTGCTTCAAATCTCCTTCG
CCTAATAGTTAGATTAGAATAA
Protein sequenceShow/hide protein sequence
MSEIIKNIHEKNRNKGESTEGRGTTDRQSSRFSLPRVRDLCEIERDFASLRELRIDLKERITTRRNLNFDKKMKNSVSDRSFYIESSDDEDLEKELDNGEDNGNESDSSG
LSMNNQNHKQSSSYNTAAWPRSYRFYPSISSASNLLRLIVRLE