; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04607 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04607
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-H2 finger protein ATL74-like
Genome locationCarg_Chr04:19431107..19434432
RNA-Seq ExpressionCarg04607
SyntenyCarg04607
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602265.1 RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia]2.6e-112100Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EG
        EG
Subjt:  EG

KAG7032948.1 RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-122100Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_022960827.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]2.9e-11998.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_022990455.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]8.5e-11998.18Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNV SPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_023524777.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.7e-11998.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

TrEMBL top hitse value%identityAlignment
A0A1S3C364 RING-H2 finger protein ATL8-like5.4e-9584Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANEAADPIEN
        RILPYCGH FHV CIDIWLH+HSTCPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQEN     AN A DPIEN
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANEAADPIEN

Query:  ASSFTEGNLNSKGSRNKNVVSPSNA
        AS F EGN NSKG RNKNV SPSNA
Subjt:  ASSFTEGNLNSKGSRNKNVVSPSNA

A0A5D3CKS4 RING-H2 finger protein ATL8-like5.4e-9584Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANEAADPIEN
        RILPYCGH FHV CIDIWLH+HSTCPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQEN     AN A DPIEN
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANEAADPIEN

Query:  ASSFTEGNLNSKGSRNKNVVSPSNA
        AS F EGN NSKG RNKNV SPSNA
Subjt:  ASSFTEGNLNSKGSRNKNVVSPSNA

A0A6J1BZK6 RING-H2 finger protein ATL38-like4.9e-9681.17Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN---EAADPIENAS
        RILPYCGH FHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEPIQEN  +     AD  ENAS
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN---EAADPIENAS

Query:  SFTEGNLNSKGSRNKNVVSPSNA
        SF EGN  SKGSRNKN V  SNA
Subjt:  SFTEGNLNSKGSRNKNVVSPSNA

A0A6J1H8I0 RING-H2 finger protein ATL74-like1.4e-11998.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

A0A6J1JQ55 RING-H2 finger protein ATL74-like4.1e-11998.18Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLL

Query:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNV SPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

SwissProt top hitse value%identityAlignment
O64762 RING-H2 finger protein ATL386.9e-1530.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  ++ +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRI

Query:  LPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        +P C H FH  C+ +WL  HSTCP+CR  L   P ++  L P
Subjt:  LPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

P0C034 RING-H2 finger protein ATL105.9e-1435.66Show/hide
Query:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHF
        V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  FP   YS E      + +C +CL+D+ S + LR+LP C H 
Subjt:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHF

Query:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK
        FHV CID WL +H TCP CR  L E   K
Subjt:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK

Q8RXX9 E3 ubiquitin-protein ligase ATL64.5e-1440.23Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        G++  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH  CID WL  H TCPVCR +L E   +  +++P
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

Q8W571 RING-H2 finger protein ATL321.5e-1434.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYHSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYHSEDLLRILPYC

Query:  GHFFHVTCIDIWLHRHSTCPVCRTSLREVPDK
         H FH+ CID WL+ H+TCPVCR++L    +K
Subjt:  GHFFHVTCIDIWLHRHSTCPVCRTSLREVPDK

Q9LM69 RING-H2 finger protein ATL805.9e-1446.58Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSL
        G++  V+ + P   +S E   S + A+C +CLA++ + D LR+LP CGH FHV CID WL  HS+CP CR  L
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSL

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein4.2e-1546.58Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSL
        G++  V+ + P   +S E   S + A+C +CLA++ + D LR+LP CGH FHV CID WL  HS+CP CR  L
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSL

AT1G49220.1 RING/U-box superfamily protein4.2e-1535.66Show/hide
Query:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHF
        V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  FP   YS E      + +C +CL+D+ S + LR+LP C H 
Subjt:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHF

Query:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK
        FHV CID WL +H TCP CR  L E   K
Subjt:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK

AT2G34990.1 RING/U-box superfamily protein4.9e-1630.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  ++ +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYHSEDLLRI

Query:  LPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        +P C H FH  C+ +WL  HSTCP+CR  L   P ++  L P
Subjt:  LPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

AT3G05200.1 RING/U-box superfamily protein3.2e-1540.23Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        G++  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH  CID WL  H TCPVCR +L E   +  +++P
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNA--QCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

AT4G40070.1 RING/U-box superfamily protein1.1e-1534.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYHSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYHSEDLLRILPYC

Query:  GHFFHVTCIDIWLHRHSTCPVCRTSLREVPDK
         H FH+ CID WL+ H+TCPVCR++L    +K
Subjt:  GHFFHVTCIDIWLHRHSTCPVCRTSLREVPDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTCTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAA
TGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGT
ATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATCACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTTCTTC
CATGTGACCTGCATAGACATATGGCTGCATCGGCATTCAACGTGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCGTTGTTTAG
TTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCATATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGA
ACCAGGCTAACGAAGCAGCGGATCCGATAGAGAACGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCT
TGA
mRNA sequenceShow/hide mRNA sequence
GCGTTCCCGATTTGTGTTCGAGCGTGTTCTTGAAATGATTCATCATGGGAATCGGTTTTCGTTCTAGTTTTGGCGTGAATGCGATTAGAATCACTCCTTTCGTGGTTGAA
TTTGCTGAAGTTCGCGCGATTTTAGTTCGCAATAGAAGAGAAATTTGAGGTTTCGATTAGTGCAGAAAGGGAGATTTGATTTGAGGAGAAGAGGTTATTTGGAGAATGAT
GTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTCTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTT
CAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGTATAGT
GATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATCACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTTCTTCCATGT
GACCTGCATAGACATATGGCTGCATCGGCATTCAACGTGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCGTTGTTTAGTTCAG
CCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCATATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGAACCAG
GCTAACGAAGCAGCGGATCCGATAGAGAACGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCTTGA
Protein sequenceShow/hide protein sequence
MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFF
HVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANEAADPIENASSFTEGNLNSKGSRNKNVVSPSNA