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Carg04654 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04654
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin-related protein 2/3 complex subunit
Genome locationCarg_Chr11:12897779..12899681
RNA-Seq ExpressionCarg04654
SyntenyCarg04654
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR017383 - Actin-related protein 2/3 complex subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022984.1 Actin-related protein 2/3 complex subunit 1A, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-89100Show/hide
Query:  MLHFEICLFVMWILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQ
        MLHFEICLFVMWILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQ
Subjt:  MLHFEICLFVMWILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQ

Query:  GVGKESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        GVGKESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
Subjt:  GVGKESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

XP_022930887.1 actin-related protein 2/3 complex subunit 1A-like [Cucurbita moschata]3.8e-6082.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQ                         FSEAFGKLYGQPRQGVG ESVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

XP_022989257.1 actin-related protein 2/3 complex subunit 1A-like [Cucurbita maxima]6.1e-5880.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGSQ                         FSEAFGKLYGQPRQ VG ESVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKV IWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

XP_023531973.1 actin-related protein 2/3 complex subunit 1A-like [Cucurbita pepo subsp. pepo]2.1e-5881.33Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGSQ                         FSEAFGKLYGQPRQGV  ESVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

XP_038886984.1 actin-related protein 2/3 complex subunit 1A-like [Benincasa hispida]7.5e-5678Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPM FAADERGIWSFIRFLGERKPAS SKYGSQ                         FSEAFGKLYGQPRQGVG +SVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RG VHENCIN IVPLRER VSTIKRFSTSGLDGKV IWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

TrEMBL top hitse value%identityAlignment
A0A1S3BM68 Actin-related protein 2/3 complex subunit7.6e-5474.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDC+PM FAADERGIWSF+RFLGERK AS SKYGSQ                         FSEAFGKLYGQPRQGVG +SVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RG VHENCINCIVPL+E  VSTIKRFSTSGLDGKV IWDLEGQ DLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

A0A6J1D3Z7 Actin-related protein 2/3 complex subunit2.9e-5373.33Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVG+DCNPMVFAADERGIWSFIRFLGERK  S S YGSQ                         FSEAFGKLYGQP+ GVG +SVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RG VHENCINCIVPLRE + STIKRFSTSGLDGKV IWDLEGQ DLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

A0A6J1ERW9 Actin-related protein 2/3 complex subunit1.9e-6082.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQ                         FSEAFGKLYGQPRQGVG ESVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

A0A6J1GLX8 Actin-related protein 2/3 complex subunit3.8e-5374.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIG GFDCNPM FAADERGIWSFIRFLGERK AS SKYGSQ                         FSEAFGKLYGQ +QGVG +SVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RG VHENCI CIVPLRE  VSTIKRFSTSGLDGKV IWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

A0A6J1JFB5 Actin-related protein 2/3 complex subunit3.0e-5880.67Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGSQ                         FSEAFGKLYGQPRQ VG ESVESSRL
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL
        RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKV IWDLEGQADLSQYL
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

SwissProt top hitse value%identityAlignment
O80856 Actin-related protein 2/3 complex subunit 1A1.9e-3051.41Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+NCIN IV L +     + RFSTSGLDGKVAIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

O96622 Actin-related protein 2/3 complex subunit 19.7e-0626.24Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL
        +L+++E  + GVG+DC P++   ++ G W   ++ GE   AS     +                           SE   +   Q +  +G ES  + + 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSRL

Query:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
           VH+NCI  IVP +      +  FSTSGLDG + +W ++
Subjt:  RGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

Q9SJW6 Actin-related protein 2/3 complex subunit 1B2.8e-2950.7Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+N I  IVPL +     + RFSTSGLDGK+AIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

Arabidopsis top hitse value%identityAlignment
AT2G30910.1 actin-related protein C1A1.4e-3151.41Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+NCIN IV L +     + RFSTSGLDGKVAIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

AT2G30910.2 actin-related protein C1A1.4e-3151.41Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+NCIN IV L +     + RFSTSGLDGKVAIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

AT2G30910.3 actin-related protein C1A1.4e-3151.41Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+NCIN IV L +     + RFSTSGLDGKVAIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE

AT2G31300.1 actin-related protein C1B2.0e-3050.7Show/hide
Query:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR
        +LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y SQ                         FSEAFGK YG   Q     + ++S 
Subjt:  ILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESSR

Query:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE
         RG VH+N I  IVPL +     + RFSTSGLDGK+AIWDLE
Subjt:  LRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCACTTCGAGATTTGCCTCTTCGTGATGTGGATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGA
AAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAACCAGCTTCAGCTTCAAAATATGGATCCCAGGTATTGCATCGCTTTAACTTTGTCTGCAGACGGCCTG
ATCTAAATGGGTCGTTGACTGTTCAGTTGTTCCACCCTTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGGCAAAGAATCAGTTGAATCTTCA
AGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGT
TGCTATTTGGGACTTGGAGGGACAGGCTGATCTATCTCAATACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCACTTCGAGATTTGCCTCTTCGTGATGTGGATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGA
AAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAACCAGCTTCAGCTTCAAAATATGGATCCCAGGTATTGCATCGCTTTAACTTTGTCTGCAGACGGCCTG
ATCTAAATGGGTCGTTGACTGTTCAGTTGTTCCACCCTTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGGCAAAGAATCAGTTGAATCTTCA
AGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGT
TGCTATTTGGGACTTGGAGGGACAGGCTGATCTATCTCAATACTTGTGAACCTTGATTCATTAACTTTCTCACTACCATGTAAAGAATCTTGCTCTCGGCAGAGTCACAT
GCCTTGTGTATCATAGCAGCTGTGAGGAACTGATTGCCTTTTCTTCTTGTAGCAGACAAGCGAGTTTGATTTTGTGTATGTATGCATTTTCAGCTAAAATTTTGCTCTTA
GAGATTTCATACACATCATTGGAGTTCAATCACTCTCATTTAGGTCTCAATCTATGTTCAGACTATTGGTTTTACGTCTTCTATAATGTTCTCTCTCTCGAAACACTCCG
TATCGTTTCATACTCTGTGCTGTTTTTGTTTGATATGAAAATATCAAGATTAAACTCAGGCATGAAC
Protein sequenceShow/hide protein sequence
MLHFEICLFVMWILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQVLHRFNFVCRRPDLNGSLTVQLFHPFSEAFGKLYGQPRQGVGKESVESS
RLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL