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Carg04670 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04670
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRWP-RK domain-containing protein
Genome locationCarg_Chr11:12958791..12961180
RNA-Seq ExpressionCarg04670
SyntenyCarg04670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023000.1 hypothetical protein SDJN02_16736 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-81100Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKHECSDATACANLLPNCRWRRREKK
        ADLQGTHLLTALRKRSLERGRKVLKHECSDATACANLLPNCRWRRREKK
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKHECSDATACANLLPNCRWRRREKK

XP_022930611.1 uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata]9.6e-66100Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKH
        ADLQGTHLLTALRKRSLERGRKVLKH
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKH

XP_022930612.1 uncharacterized protein LOC111437021 isoform X2 [Cucurbita moschata]4.3e-6699.21Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKHE
        ADLQGTHLLTALRKRSLERGRKVLKH+
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKHE

XP_022989266.1 uncharacterized protein LOC111486389 [Cucurbita maxima]6.2e-6599.21Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEV DKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKH
        ADLQGTHLLTALRKRSLERGRKVLKH
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKH

XP_023529351.1 uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo]9.6e-66100Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKH
        ADLQGTHLLTALRKRSLERGRKVLKH
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKH

TrEMBL top hitse value%identityAlignment
A0A2P5D852 Uncharacterized protein8.0e-1845.8Show/hide
Query:  NGTPQSLQ--PGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPD-------ETNNEVDDKHHFKVVNDGSASI-IDQEKSGS
        N    SLQ   G  N QI RP  V ST+  +G T+LDEFK+GFPS GL ++S KWWGS+CPD       +     D     + V++ + S+ +D+EKSG+
Subjt:  NGTPQSLQ--PGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPD-------ETNNEVDDKHHFKVVNDGSASI-IDQEKSGS

Query:  IEEDLQADLQGTHLLTALRKRSLERGRKVLK
         EE  +   QGT LLTA+RK+  E GR+VLK
Subjt:  IEEDLQADLQGTHLLTALRKRSLERGRKVLK

A0A6J1D407 uncharacterized protein LOC1110168308.2e-4779.23Show/hide
Query:  MSKLNGTPQSL---QPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFK-VVNDGSASIIDQEKSGSIE
        MSKLNG PQSL   Q GNINAQ+RRP +VQSTN VQG T L+EFKYGFPSGGLPS+SNKWWGSS PDETNNE D KH+FK VV DGS S+IDQEKS SIE
Subjt:  MSKLNGTPQSL---QPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFK-VVNDGSASIIDQEKSGSIE

Query:  EDLQADLQGTHLLTALRKRSLERGRKVLKH
        EDLQADL GT LLTALRKRS+ERGRK LK+
Subjt:  EDLQADLQGTHLLTALRKRSLERGRKVLKH

A0A6J1ER19 uncharacterized protein LOC111437021 isoform X22.1e-6699.21Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKHE
        ADLQGTHLLTALRKRSLERGRKVLKH+
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKHE

A0A6J1ERE4 uncharacterized protein LOC111437021 isoform X14.6e-66100Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKH
        ADLQGTHLLTALRKRSLERGRKVLKH
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKH

A0A6J1JJK7 uncharacterized protein LOC1114863893.0e-6599.21Show/hide
Query:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ
        MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEV DKHHFKVVNDGSASIIDQEKSGSIEEDLQ
Subjt:  MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQ

Query:  ADLQGTHLLTALRKRSLERGRKVLKH
        ADLQGTHLLTALRKRSLERGRKVLKH
Subjt:  ADLQGTHLLTALRKRSLERGRKVLKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06500.1 unknown protein1.1e-0659.38Show/hide
Query:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Subjt:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG

AT1G06500.2 unknown protein1.1e-0659.38Show/hide
Query:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Subjt:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG

AT1G06500.3 unknown protein1.1e-0659.38Show/hide
Query:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Subjt:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG

AT1G06500.4 unknown protein1.1e-0659.38Show/hide
Query:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG
Subjt:  STNWVQGPTSLDEFKYGFPSGGLPSISNKWWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAATTAAATGGCACTCCTCAAAGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAG
TTTAGATGAGTTCAAGTATGGATTCCCCTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGC
ATCACTTCAAAGTAGTAAATGATGGTTCCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACG
GCTTTGAGAAAAAGAAGTTTGGAGCGAGGACGAAAAGTACTAAAGCATGAGTGTTCTGATGCGACAGCTTGTGCGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGA
GAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAAAGAAAGTTGTATCACTCAATCAGATAATATTTTAGGAAATCAATATACCCACATATAATTTCGTCGTCACTGATTTTTTCGACATCGTTATCCATTATACATGC
TCATTTAGGAAATCAGATAATATTTTCTTGAGAGGCTTGGTTCACAATTCATCTGCCTTTTTCTTCCAACTGATCTTCTCATTTACTGAAACTTGAGAGGTCTTCCTTGG
CTCAACAATTTACTTAGACTTGAGAGGTGTAGCTAATGTAAGTTTGGTTCTAATTGTCTCTGATCTCGCTGTTCATAGTTCTTTTGGTTTTCATATGTTATCAATCTGTT
GACAAGATATCCGTTAAATTAAGTTTTGCATGTATTTGAGTTCTAGAGTGATAATTGTACTATATTGTTATATTTTTCAAATAATAATGCTTTTTAGGTCTCATGCATAC
TACTGAACTTACTACTTCTATTCTTCTTTCTCACTTTCACTTTTATCATCCCACACAGTAATAGCCAGCAAGTGAATGTAAAAATGTCCAAATTAAATGGCACTCCTCAA
AGCTTGCAGCCCGGAAACATTAATGCGCAGATCAGGCGTCCTCTGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAACAAGTTTAGATGAGTTCAAGTATGGATTCCC
CTCTGGTGGATTGCCATCTATATCAAATAAGTGGTGGGGAAGTAGCTGTCCAGATGAAACAAATAATGAAGTAGATGACAAGCATCACTTCAAAGTAGTAAATGATGGTT
CCGCTTCTATAATAGACCAAGAGAAATCTGGAAGTATAGAGGAGGATCTTCAAGCTGATCTTCAGGGAACACACCTTCTGACGGCTTTGAGAAAAAGAAGTTTGGAGCGA
GGACGAAAAGTACTAAAGCATGAGTGTTCTGATGCGACAGCTTGTGCGAACCTGTTGCCAAATTGTAGATGGAGAAGAAGAGAGAAAAAGTAGATGATGAAGGGTAACCG
ACAATTATAGTAGACTGTTGGAAACAGGTTGTTAAAAATGTTTGGGCCAGAGGTGGAGGGGCCCCTCCGGAGGTCCACCGGAGGGGCCATTCTTAAACAACAGCCCATGC
TTGTTGCTCCCTGCAGATGACCCGTTTCCGTCAGGTGGCCGCCATTACTCATCACATCCAAATTCTGAACTTTAAAACATCTCTTTCTACTCCTTTTCAAATTTTTATTG
ATGCAATGTAAGTGCTGTTCATTACTATTTCTCTCTTCTAAAGCCAGAAGTAAATTCTTTGTTTTTTGGCCCATTTGAACAGGTAAAGACATAAATAGTCCCTTTAGTTT
GGTCAAAAGTTTGAATCTTGTTCACACTGTGTTGCGTTCTCGAGGAAAAGATGGACGCCATTAGTTTTTTGCAGTTCTGGATTTTGAAGTAATTTTGGTGTGTTACGAAG
TTGATTTTAATTACTAATTCACTTACCTTAGGTGTCATTATCATCTTTGTATTCGTTAGCTTTTCTTCTCTATATGTCTCAATGTAATTAACTAATCAACTTTAATCCAT
AGGCTTCAATTTGTAGCAATTTGTTCATG
Protein sequenceShow/hide protein sequence
MSKLNGTPQSLQPGNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWGSSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLT
ALRKRSLERGRKVLKHECSDATACANLLPNCRWRRREKK