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Carg04672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCYSTM domain-containing protein
Genome locationCarg_Chr11:12984236..12984588
RNA-Seq ExpressionCarg04672
SyntenyCarg04672
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589304.1 hypothetical protein SDJN03_17869, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3392.21Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKG   +  C
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

KAG7023002.1 hypothetical protein SDJN02_16738, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-42100Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPCRIFEFP
        MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPCRIFEFP
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPCRIFEFP

XP_022989101.1 cysteine-rich and transmembrane domain-containing protein B-like isoform X1 [Cucurbita maxima]4.9e-2784.51Show/hide
Query:  QQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        + + +AYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKG   +  C
Subjt:  QQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

XP_022989102.1 cysteine-rich and transmembrane domain-containing protein B-like isoform X2 [Cucurbita maxima]2.9e-2791.04Show/hide
Query:  MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKG   +  C
Subjt:  MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

XP_023530417.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]2.5e-3188.31Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        MSQY HQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVR+GPQYPHQT TPQTQSKGDGFWKG   +  C
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

TrEMBL top hitse value%identityAlignment
A0A0A0K5N8 CYSTM domain-containing protein2.5e-2474.36Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC
        MSQYR+Q+I M YPAPPPSY A E+ KE  SGPYVAAPPPVGYPVRDGPQYPHQT F  QTQS+GDGFWKG   +  C
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC

A0A1S3BHK1 cysteine-rich and transmembrane domain-containing protein A-like1.2e-2373.08Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC
        MSQYR+Q+I M YPAPPPSY A E+ KE  SGPYVAAPPPVGYPVRDGPQYPHQT    QTQS+GDGFWKG   +  C
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC

A0A5A7USJ3 Cysteine-rich and transmembrane domain-containing protein A-like1.2e-2373.08Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC
        MSQYR+Q+I M YPAPPPSY A E+ KE  SGPYVAAPPPVGYPVRDGPQYPHQT    QTQS+GDGFWKG   +  C
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQT-FTPQTQSKGDGFWKGWSVSSPC

A0A6J1JEV3 cysteine-rich and transmembrane domain-containing protein B-like isoform X21.4e-2791.04Show/hide
Query:  MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKG   +  C
Subjt:  MAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

A0A6J1JJ37 cysteine-rich and transmembrane domain-containing protein B-like isoform X12.4e-2784.51Show/hide
Query:  QQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        + + +AYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKG   +  C
Subjt:  QQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32190.2 unknown protein7.1e-0847.3Show/hide
Query:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTP-QTQSKGDGFWKGWSV
        MSQY   Q   AYP PP S           +GPY+  PPP+GYP  D     H T  P +T+SKGDGF KGW V
Subjt:  MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTP-QTQSKGDGFWKGWSV

AT3G22240.1 unknown protein1.6e-0744.64Show/hide
Query:  AVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC
        +VE+  +++SGPY  +PPP+GYP RD           +T+SKGDGFWKG   +  C
Subjt:  AVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAGTATCGCCATCAACAAATTCCCATGGCCTATCCAGCGCCGCCTCCGTCGTATCCGGCGGTGGAGGAAGTGAAAGAGTCGAATTCGGGGCCTTATGTTGCAGC
GCCGCCGCCAGTTGGGTATCCGGTGAGAGACGGTCCACAGTACCCGCACCAGACTTTTACGCCACAAACTCAATCCAAGGGGGATGGGTTTTGGAAAGGATGGTCAGTCT
CCTCTCCTTGTAGAATATTTGAATTCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAGTATCGCCATCAACAAATTCCCATGGCCTATCCAGCGCCGCCTCCGTCGTATCCGGCGGTGGAGGAAGTGAAAGAGTCGAATTCGGGGCCTTATGTTGCAGC
GCCGCCGCCAGTTGGGTATCCGGTGAGAGACGGTCCACAGTACCCGCACCAGACTTTTACGCCACAAACTCAATCCAAGGGGGATGGGTTTTGGAAAGGATGGTCAGTCT
CCTCTCCTTGTAGAATATTTGAATTCCCTTAA
Protein sequenceShow/hide protein sequence
MSQYRHQQIPMAYPAPPPSYPAVEEVKESNSGPYVAAPPPVGYPVRDGPQYPHQTFTPQTQSKGDGFWKGWSVSSPCRIFEFP