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Carg04677 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04677
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:12994248..12997190
RNA-Seq ExpressionCarg04677
SyntenyCarg04677
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023007.1 hypothetical protein SDJN02_16743, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-135100Show/hide
Query:  MIIRLVPNAKALTWGCIISGTDGGRVKLRQCDDVLVRKRGGCQTRFMRRVLGWGNRGLMMKPKIIEQRNQSFLAPQYTAAQCRRRWRRALLTEQVIRGLH
        MIIRLVPNAKALTWGCIISGTDGGRVKLRQCDDVLVRKRGGCQTRFMRRVLGWGNRGLMMKPKIIEQRNQSFLAPQYTAAQCRRRWRRALLTEQVIRGLH
Subjt:  MIIRLVPNAKALTWGCIISGTDGGRVKLRQCDDVLVRKRGGCQTRFMRRVLGWGNRGLMMKPKIIEQRNQSFLAPQYTAAQCRRRWRRALLTEQVIRGLH

Query:  SIQRYVHTTGLVGKEELKSGKVEIKNESKDSRPGPDHSSTKAPLNFLPHKQSKILGLGLGGQYDSPLLVWLCILLMLHLPVLDILQNTAIAIDPLRPWFS
        SIQRYVHTTGLVGKEELKSGKVEIKNESKDSRPGPDHSSTKAPLNFLPHKQSKILGLGLGGQYDSPLLVWLCILLMLHLPVLDILQNTAIAIDPLRPWFS
Subjt:  SIQRYVHTTGLVGKEELKSGKVEIKNESKDSRPGPDHSSTKAPLNFLPHKQSKILGLGLGGQYDSPLLVWLCILLMLHLPVLDILQNTAIAIDPLRPWFS

Query:  QNPRLPSNFISVIALLLPIAPLVEGTSAGLWSFSFQFKALTE
        QNPRLPSNFISVIALLLPIAPLVEGTSAGLWSFSFQFKALTE
Subjt:  QNPRLPSNFISVIALLLPIAPLVEGTSAGLWSFSFQFKALTE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCAGGTTGGTACCCAACGCAAAAGCTTTGACATGGGGCTGCATTATTAGTGGCACAGATGGAGGGCGTGTTAAGTTGAGGCAATGCGATGATGTCTTGGTGAG
GAAACGAGGTGGGTGTCAGACCAGGTTTATGAGAAGAGTATTGGGATGGGGAAATAGGGGGTTGATGATGAAGCCCAAAATCATCGAACAAAGGAACCAAAGTTTCCTCG
CCCCACAATACACCGCCGCCCAGTGCCGGCGCCGTTGGAGGAGGGCGCTGCTCACAGAACAAGTAATCCGAGGTCTCCACTCCATACAACGTTATGTACATACAACAGGT
CTGGTAGGAAAGGAAGAGTTAAAGTCGGGTAAAGTGGAGATTAAGAATGAAAGTAAAGACTCCAGGCCCGGCCCAGATCATTCTTCGACGAAAGCCCCACTGAACTTTTT
ACCGCATAAACAGTCCAAAATCTTGGGCCTAGGGCTCGGTGGGCAATATGATTCGCCATTGTTAGTTTGGTTATGTATACTTCTTATGCTACATCTGCCCGTGTTGGATA
TTCTCCAGAATACGGCCATTGCCATAGATCCGCTTCGACCTTGGTTTAGCCAAAACCCGCGCCTTCCCTCCAACTTTATCTCTGTCATCGCTCTTCTTCTACCGATAGCT
CCCCTAGTTGAAGGGACTTCTGCTGGACTCTGGAGTTTCAGCTTTCAATTCAAAGCATTGACCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATCAGGTTGGTACCCAACGCAAAAGCTTTGACATGGGGCTGCATTATTAGTGGCACAGATGGAGGGCGTGTTAAGTTGAGGCAATGCGATGATGTCTTGGTGAG
GAAACGAGGTGGGTGTCAGACCAGGTTTATGAGAAGAGTATTGGGATGGGGAAATAGGGGGTTGATGATGAAGCCCAAAATCATCGAACAAAGGAACCAAAGTTTCCTCG
CCCCACAATACACCGCCGCCCAGTGCCGGCGCCGTTGGAGGAGGGCGCTGCTCACAGAACAAGTAATCCGAGGTCTCCACTCCATACAACGTTATGTACATACAACAGGT
CTGGTAGGAAAGGAAGAGTTAAAGTCGGGTAAAGTGGAGATTAAGAATGAAAGTAAAGACTCCAGGCCCGGCCCAGATCATTCTTCGACGAAAGCCCCACTGAACTTTTT
ACCGCATAAACAGTCCAAAATCTTGGGCCTAGGGCTCGGTGGGCAATATGATTCGCCATTGTTAGTTTGGTTATGTATACTTCTTATGCTACATCTGCCCGTGTTGGATA
TTCTCCAGAATACGGCCATTGCCATAGATCCGCTTCGACCTTGGTTTAGCCAAAACCCGCGCCTTCCCTCCAACTTTATCTCTGTCATCGCTCTTCTTCTACCGATAGCT
CCCCTAGTTGAAGGGACTTCTGCTGGACTCTGGAGTTTCAGCTTTCAATTCAAAGCATTGACCGAATAG
Protein sequenceShow/hide protein sequence
MIIRLVPNAKALTWGCIISGTDGGRVKLRQCDDVLVRKRGGCQTRFMRRVLGWGNRGLMMKPKIIEQRNQSFLAPQYTAAQCRRRWRRALLTEQVIRGLHSIQRYVHTTG
LVGKEELKSGKVEIKNESKDSRPGPDHSSTKAPLNFLPHKQSKILGLGLGGQYDSPLLVWLCILLMLHLPVLDILQNTAIAIDPLRPWFSQNPRLPSNFISVIALLLPIA
PLVEGTSAGLWSFSFQFKALTE