; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04679 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04679
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr11:13017765..13018379
RNA-Seq ExpressionCarg04679
SyntenyCarg04679
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589310.1 hypothetical protein SDJN03_17875, partial [Cucurbita argyrosperma subsp. sororia]1.9e-10496.68Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLL-------FNASAKDFNGAACN
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLL       FNASAKDFNGAACN
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLL-------FNASAKDFNGAACN

Query:  RSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMF
        RSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMF
Subjt:  RSWIPSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMF

Query:  LGIIRIVLCDK
        LGIIRIVLCDK
Subjt:  LGIIRIVLCDK

KAG7023009.1 hypothetical protein SDJN02_16745, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-106100Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

XP_022930642.1 uncharacterized protein LOC111437043 [Cucurbita moschata]1.3e-10599.02Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNAS KDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKT+LEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

XP_022989125.1 uncharacterized protein LOC111486287 [Cucurbita maxima]6.4e-10599.02Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKET IDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKG EFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

XP_023529232.1 uncharacterized protein LOC111792131 [Cucurbita pepo subsp. pepo]3.4e-10699.51Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNN+SLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

TrEMBL top hitse value%identityAlignment
A0A0A0K424 Uncharacterized protein8.2e-9889.66Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        M+D+NN++LS+ME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKEITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRDF+TLFFFSVSCMFLGIIR+V
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCD
        LC+
Subjt:  LCD

A0A1S3BHA3 uncharacterized protein LOC1034896446.3e-9889.66Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        M+D+NN++LSIME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKEITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRDF+TLFFFSVSCMFLG+IR+V
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCD
        LC+
Subjt:  LCD

A0A5A7U7C4 Putative transmembrane protein6.3e-9889.66Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        M+D+NN++LSIME KPSHPLHQIA+TPTHKLLLKQWLKEEELIFGR+SLKETQIDSVRKEITMLHIFFFVFHST+ILLLFNAS KDF+G AC RSWIPS+
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLSKCV+ELKRKG+EFDLLKEVDALRRAKSLRVE+KAVRKWSSRDF+TLFFFSVSCMFLG+IR+V
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCD
        LC+
Subjt:  LCD

A0A6J1ER49 uncharacterized protein LOC1114370436.3e-10699.02Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNAS KDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKT+LEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

A0A6J1JLI3 uncharacterized protein LOC1114862873.1e-10599.02Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
        MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKET IDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSI

Query:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
        CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKG EFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV
Subjt:  CSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIV

Query:  LCDK
        LCDK
Subjt:  LCDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12870.1 unknown protein2.9e-7972.82Show/hide
Query:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGA---ACNRSWI
        M  + + +  IME+K  HPLHQIA TPTHKLLLKQWLKEEELI  RVS KE+QIDSVR+EIT L+IFFF+FHS S+LLLF+AS+   + A   AC RSWI
Subjt:  MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGA---ACNRSWI

Query:  PSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGII
        PS+C+LL SLGIIWAVRYK+++E+HLEKLLEREKED  LL KCVEELK+KG+EFDLLKEVDALRRAKSLRVESK V+KWS+RDF+TLFFFSVSC+ L +I
Subjt:  PSICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGII

Query:  RIVLCD
        R++LCD
Subjt:  RIVLCD

AT5G56120.1 unknown protein4.9e-2635.29Show/hide
Query:  NNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKD-----FNGAACNRSWIPS
        +N  + I++    HPL +I+++P H LLLK W +EE+L   RV LKE++++S+++EI  L  FF VFH     L++++S  D      + A C + WIPS
Subjt:  NNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKD-----FNGAACNRSWIPS

Query:  ICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESK-AVRKWSSRDFMTLFFFSVSCMFLGIIR
          SL  SL +++ V+ K  +   + + + RE+ D   L++CV EL+ KG  FDL KE  + +R KS  VE K     W S+  +T+     + +F  + +
Subjt:  ICSLLFSLGIIWAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESK-AVRKWSSRDFMTLFFFSVSCMFLGIIR

Query:  IVLC
         +LC
Subjt:  IVLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATAACAACAACAGATCCTTATCAATCATGGAATCAAAACCTTCACACCCTCTTCACCAAATTGCCAAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCT
CAAAGAGGAAGAACTAATCTTCGGCAGAGTCTCTCTCAAGGAAACCCAAATCGATTCTGTTCGAAAGGAAATCACTATGCTTCACATTTTCTTCTTCGTCTTCCACTCCA
CATCTATACTCCTCCTCTTCAACGCCTCCGCCAAGGACTTCAACGGCGCAGCCTGCAACAGATCCTGGATTCCCTCCATTTGTTCTCTCTTATTCTCTCTGGGCATCATT
TGGGCTGTCAGATACAAGACTGATCTCGAGGCCCATTTGGAGAAATTGTTAGAAAGGGAAAAAGAAGATAGAAATTTGCTGTCCAAGTGTGTTGAAGAGTTGAAGCGGAA
AGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGAGAGCGAAGAGCTTGCGGGTCGAAAGTAAGGCTGTGAGAAAATGGTCTTCAAGGGATTTCATGACTC
TGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGATTATTAGGATTGTTCTATGTGACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGATAACAACAACAGATCCTTATCAATCATGGAATCAAAACCTTCACACCCTCTTCACCAAATTGCCAAAACCCCAACCCACAAACTTCTTCTCAAGCAGTGGCT
CAAAGAGGAAGAACTAATCTTCGGCAGAGTCTCTCTCAAGGAAACCCAAATCGATTCTGTTCGAAAGGAAATCACTATGCTTCACATTTTCTTCTTCGTCTTCCACTCCA
CATCTATACTCCTCCTCTTCAACGCCTCCGCCAAGGACTTCAACGGCGCAGCCTGCAACAGATCCTGGATTCCCTCCATTTGTTCTCTCTTATTCTCTCTGGGCATCATT
TGGGCTGTCAGATACAAGACTGATCTCGAGGCCCATTTGGAGAAATTGTTAGAAAGGGAAAAAGAAGATAGAAATTTGCTGTCCAAGTGTGTTGAAGAGTTGAAGCGGAA
AGGGGTTGAATTTGATTTGTTGAAGGAGGTGGATGCGCTGCGGAGAGCGAAGAGCTTGCGGGTCGAAAGTAAGGCTGTGAGAAAATGGTCTTCAAGGGATTTCATGACTC
TGTTTTTCTTCTCTGTTTCGTGTATGTTTCTTGGGATTATTAGGATTGTTCTATGTGACAAGTGA
Protein sequenceShow/hide protein sequence
MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEITMLHIFFFVFHSTSILLLFNASAKDFNGAACNRSWIPSICSLLFSLGII
WAVRYKTDLEAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDFMTLFFFSVSCMFLGIIRIVLCDK