CuGenDBv2

Gene ID	Carg04720
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	Carg_Chr13:9643747..9646505
RNA-Seq Expression	Carg04720
Synteny	Carg04720
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584446.1 BTB/POZ and TAZ domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-58

100

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGS
        TVESAGITEEVDTQGS
Subjt:  TVESAGITEEVDTQGS

KAG7020036.1 UPF0426 protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

5.3e-65

100

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

1.1e-62

97.66

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIF+PKKPMRAN LRLGCSNSTN ICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_023000721.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita maxima]

6.5e-63

96.88

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTA VLLGGMGKFREGNRHSIF+PKKPMRANCLRLGC+NSTNAICAFLF PLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

XP_023518976.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]

2.2e-63

97.66

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRH IF+PKKPMRANCLRLGCSNSTN ICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

8.4e-48

78.91

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N +SI + KKP+R++  RLG +NSTN I AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+ EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

1.4e-50

82.03

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  + HSI + KKPMR++ LRLG +NSTN I AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

1.4e-50

82.03

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  + HSI + KKPMR++ LRLG +NSTN I AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

5.4e-63

97.66

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTASVLLGGMGKFREGNRHSIF+PKKPMRAN LRLGCSNSTN ICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

3.2e-63

96.88

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Query:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAGLLLHSSSTA VLLGGMGKFREGNRHSIF+PKKPMRANCLRLGC+NSTNAICAFLF PLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGITEEVDTQGSVQEDGPTEIEIE
        TVESAGITEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGITEEVDTQGSVQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

6.9e-07

40.3

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Query:  PVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ P  I+I+
Subjt:  PVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

4.6e-19

64.86

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Query:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

3.3e-20

64.86

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Query:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G V   ED P +IEIE
Subjt:  FNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGSV--QEDGPTEIEIE

Sequences

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CDS sequence

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ATGGCCGGTCTTCTTCTCCACTCCTCTTCAACTGCCAGCGTTCTGCTTGGAGGAATGGGGAAATTTAGGGAAGGGAATCGTCATTCGATTTTTACGCCCAAGAAACCTAT
GCGTGCTAACTGCCTTCGTCTCGGCTGCAGTAATTCAACGAATGCCATCTGCGCTTTCCTTTTCAATCCTTTGGAGGATCCTGTTGTCAAAGAAGCTCTTAAGGAGCCGG
TTGCGTTCGCAGGTGGGCTATTTGCTGGGCTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGCTGGAATCACAGAAGAA
GTTGACACCCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATCGAGATTGAATGA

mRNA sequence

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AAGTGAGTGTTTCTGGAAATGTTTGGCCAATTGCAAGAAGCAAACAAGGGGGAGTTTTAAGCCATTAACCCATTTCTAACGCCAATATCTTCATCCTCTTCTTCGATCCG
AAGCAGCTCCATTTGCGTCATCGGAGACTCTCATCCATGGCCGGTCTTCTTCTCCACTCCTCTTCAACTGCCAGCGTTCTGCTTGGAGGAATGGGGAAATTTAGGGAAGG
GAATCGTCATTCGATTTTTACGCCCAAGAAACCTATGCGTGCTAACTGCCTTCGTCTCGGCTGCAGTAATTCAACGAATGCCATCTGCGCTTTCCTTTTCAATCCTTTGG
AGGATCCTGTTGTCAAAGAAGCTCTTAAGGAGCCGGTTGCGTTCGCAGGTGGGCTATTTGCTGGGCTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTT
AAGAAGACGGTGGAATCTGCTGGAATCACAGAAGAAGTTGACACCCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATCGAGATTGAATGATCCCATGAATATAAACT
GGAAAAGTGGGGATAAAAGGGTATCTGATCTGATTCGTCTCAATATTACTATGGCTCCCTTGATTTAGAATAAGAAATGAAATGGTTTAGGAGTTACCCCCTTTTCATAA
TCCAAATACTCTACGACTTCCTCTAAAAATACTTCTCGATTCAGAAGGAAACGCATCATTAGTGTTTACATATTTTTGCAAAGTACTTTTACACAAACATACGGCTGCAC
ATACTAGTTTTTATGTGAATTTTTTATGGAGGAAGCAAATGCCCCTAGAACACAAGGAGTTGGCTAGTAAAACATCAAGTATAGGACCATCAGTGATTTGGGTCCTTCGG
TTCACATAATCGAGTTCAAGCCTTAAAAAACTTCCAAGTTCTTGCATCTTTTGTCCACGTTTTGAGAAACAATTCTTTGCATTTTAAGCTAATCAATCCTGTA

Protein sequence

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MAGLLLHSSSTASVLLGGMGKFREGNRHSIFTPKKPMRANCLRLGCSNSTNAICAFLFNPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEE
VDTQGSVQEDGPTEIEIE

Carg04720 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome