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Carg04722 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04722
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH myb-type domain-containing protein
Genome locationCarg_Chr13:9633225..9633659
RNA-Seq ExpressionCarg04722
SyntenyCarg04722
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584445.1 Protein REVEILLE 7, partial [Cucurbita argyrosperma subsp. sororia]4.0e-77100Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

KAG7020034.1 hypothetical protein SDJN02_19002, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-77100Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

XP_022924008.1 protein REVEILLE 7-like [Cucurbita moschata]1.2e-7699.31Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPY+KAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

XP_023001089.1 protein REVEILLE 7-like [Cucurbita maxima]3.0e-7295.14Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPY+KAMPNAPQTCWSL QNVP+FYLA SDQTSTGTCTDHVMEERIQ+DN LESSCADSCSGSPSKNEN+NQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

XP_023519511.1 protein REVEILLE 7-like [Cucurbita pepo subsp. pepo]5.8e-7698.61Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPY+KAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDT SALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

TrEMBL top hitse value%identityAlignment
A0A0A0LSL2 HTH myb-type domain-containing protein6.1e-6385.31Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAP+ TLG Q++SVPY+KA+PNA QTCWSL Q VPYFYLAPSDQTSTGT TDH+MEERIQ+DNS ESS ADSCSGSP K++NE QSPEV+CQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERE RRARVC
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC

A0A1S3AZR8 protein REVEILLE 2-like1.0e-6588.81Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        M PGGAPT TLGNQDKSVPY+KA PNAPQTCWSL QNVPYFYLAPSDQTSTGT TDH+MEERIQ+DNS ESS ADSCSGSP K++NE QSPEV+CQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERE RRARVC
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC

A0A5A7SZI6 Protein REVEILLE 2-like1.0e-6588.81Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        M PGGAPT TLGNQDKSVPY+KA PNAPQTCWSL QNVPYFYLAPSDQTSTGT TDH+MEERIQ+DNS ESS ADSCSGSP K++NE QSPEV+CQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEERE RRARVC
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVC

A0A6J1E7Y7 protein REVEILLE 7-like5.7e-7799.31Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPY+KAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

A0A6J1KK38 protein REVEILLE 7-like1.4e-7295.14Show/hide
Query:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL
        MSPGGAPTNTLGNQDKSVPY+KAMPNAPQTCWSL QNVP+FYLA SDQTSTGTCTDHVMEERIQ+DN LESSCADSCSGSPSKNEN+NQSPEVKCQEPCL
Subjt:  MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCL

Query:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
        VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL
Subjt:  VGRGNANESKKGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCCGGTGGAGCCCCTACGAACACCTTAGGGAATCAGGACAAAAGTGTCCCTTATATGAAAGCCATGCCTAATGCTCCTCAAACTTGTTGGTCGTTGTGTCAAAA
TGTACCATATTTTTATCTTGCCCCATCTGATCAAACTTCAACTGGAACATGCACTGACCATGTTATGGAAGAAAGGATCCAAGATGACAATTCCCTGGAAAGTTCTTGTG
CGGATTCATGTTCTGGCTCCCCGAGTAAGAATGAAAACGAAAACCAGAGCCCCGAAGTAAAATGTCAAGAGCCTTGTCTGGTAGGAAGAGGTAATGCAAATGAGAGTAAG
AAGGGGTTTGTGCCTTATAAGAGATGCTTGGCTCAGAGAGATACAAGCTCCGCGCTGATTGTTTCAGAAGAGAGAGAGGGTCGGAGAGCTCGAGTTTGCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACCCGGTGGAGCCCCTACGAACACCTTAGGGAATCAGGACAAAAGTGTCCCTTATATGAAAGCCATGCCTAATGCTCCTCAAACTTGTTGGTCGTTGTGTCAAAA
TGTACCATATTTTTATCTTGCCCCATCTGATCAAACTTCAACTGGAACATGCACTGACCATGTTATGGAAGAAAGGATCCAAGATGACAATTCCCTGGAAAGTTCTTGTG
CGGATTCATGTTCTGGCTCCCCGAGTAAGAATGAAAACGAAAACCAGAGCCCCGAAGTAAAATGTCAAGAGCCTTGTCTGGTAGGAAGAGGTAATGCAAATGAGAGTAAG
AAGGGGTTTGTGCCTTATAAGAGATGCTTGGCTCAGAGAGATACAAGCTCCGCGCTGATTGTTTCAGAAGAGAGAGAGGGTCGGAGAGCTCGAGTTTGCTTATAG
Protein sequenceShow/hide protein sequence
MSPGGAPTNTLGNQDKSVPYMKAMPNAPQTCWSLCQNVPYFYLAPSDQTSTGTCTDHVMEERIQDDNSLESSCADSCSGSPSKNENENQSPEVKCQEPCLVGRGNANESK
KGFVPYKRCLAQRDTSSALIVSEEREGRRARVCL