CuGenDBv2

Gene ID	Carg04729
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr13:9607751..9608113
RNA-Seq Expression	Carg04729
Synteny	Carg04729
Gene Ontology terms	GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR013865 - Protein FAM32A

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584439.1 Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-54

100

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRY
        KSVEEALDDRVKKKADRY
Subjt:  KSVEEALDDRVKKKADRY

KAG7020027.1 hypothetical protein SDJN02_18995, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.6e-56

100

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

XP_022924043.1 uncharacterized protein LOC111431590 [Cucurbita moschata]

3.6e-55

98.33

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKK+KKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETR+FGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

XP_023001360.1 uncharacterized protein LOC111495520 [Cucurbita maxima]

5.7e-53

96.67

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDID  KKKKKKKKDKSKS+ENPTDE EILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

XP_038893643.1 uncharacterized protein LOC120082512 [Benincasa hispida]

1.0e-49

90.83

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPY+G KGGRLTFKGGVLASRSKDID  KKKKKKKKDKSK+EENPTDEAEILSSADGVEG +G +YTIDAAKRMKYEELFPVETRKFGYDPNN++TKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVD6 Uncharacterized protein

3.5e-48

87.5

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDID  KKKKKKKKDKSK++ENPTD+ EIL+SADGVE  +G +YTIDAAKRMKYEELFPVETRKFGYDPNN++TKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVE+ALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

A0A5A7SXI8 Uncharacterized protein

2.3e-47

85.83

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPY+GAKGGRLTFKGGVLASRSKDID  KKKKKKKKDK+K++ENPTD+ EIL+SADGVEG +G +YTIDAAKRMKYEELFPVETRKFGYDPNN++TK 
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVE+ALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

A0A6J1C7F9 uncharacterized protein LOC111009076

1.6e-48

86.67

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDP++GAKGGRLTFKGGVLASRSK IDKKKKKKKKK+DKS+S++NPTDE EILSSAD V+G +G VYTIDAAKRMKYEELFPVET+KFGYDPNN++TKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

A0A6J1EB87 uncharacterized protein LOC111431590

1.7e-55

98.33

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKK+KKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETR+FGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

A0A6J1KIE4 uncharacterized protein LOC111495520

2.8e-53

96.67

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPYSGAKGGRLTFKGGVLASRSKDID  KKKKKKKKDKSKS+ENPTDE EILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        KSVEEALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25720.1 unknown protein

3.9e-23

53.33

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Query:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF
        MSDPY    GGRL FKGG LA+R     KKKKK+KK K+K    E+    A   S        +  +Y+IDAAK+ KY++LFPVE +KFGY P      F
Subjt:  MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKF

Query:  KSVEEALDDRVKKKADRYCK
        +S E+ALDDRVKKKADRYCK
Subjt:  KSVEEALDDRVKKKADRYCK

Sequences

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CDS sequence

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ATGTCGGATCCATATTCAGGGGCCAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCCCGCAGTAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAAGACAAAAGTAAAAGCGAGGAGAACCCCACGGACGAGGCCGAGATTTTGTCGTCGGCTGACGGTGTAGAGGGTGAAGAGGGAGTGGTGTATACTATTGATGCGGCCA
AGCGTATGAAGTATGAGGAGCTCTTCCCGGTGGAGACCAGGAAGTTCGGTTACGACCCTAACAACGCCGATACCAAGTTCAAGTCTGTGGAGGAAGCTCTTGATGACCGT
GTCAAAAAGAAGGCGGATCGTTATTGTAAATAA

mRNA sequence

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Protein sequence

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MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKKKDKSKSEENPTDEAEILSSADGVEGEEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKFKSVEEALDDR
VKKKADRYCK

Carg04729 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome