; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04780 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04780
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondof zinc finger protein 4-like
Genome locationCarg_Chr13:9322129..9322566
RNA-Seq ExpressionCarg04780
SyntenyCarg04780
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584390.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]3.2e-82100Show/hide
Query:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI
        MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI
Subjt:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI

Query:  LPSPLNLNQAGDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE
        LPSPLNLNQAGDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE
Subjt:  LPSPLNLNQAGDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE

XP_004137607.1 dof zinc finger protein DOF1.7 [Cucumis sativus]2.8e-3057.97Show/hide
Query:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        D +SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRN+PVGGG RK+K +SK K       R + +  + +  SDL++L SPL 
Subjt:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  L-NQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS
        L NQAGD + W   GRE E G  A  EG   LD LPTS
Subjt:  L-NQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS

XP_008445935.1 PREDICTED: dof zinc finger protein DOF3.4-like [Cucumis melo]1.4e-3261.31Show/hide
Query:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        D +SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K +S  KPK A     + +S S    SDL++  SPL 
Subjt:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS
        LNQ+GD   W   GRE E G  A  EGFG LDHL TS
Subjt:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS

XP_022924220.1 dof zinc finger protein 4-like [Cucurbita moschata]1.0e-6493.08Show/hide
Query:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPK--AAMIVRDSPSSKSNSWKSDL
        M ELGHMDLQDIRSKPWKCPRC S DTKFCYYNNYN SQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNS K KPK  AAMIVRDSPSSKSNSWKSDL
Subjt:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPK--AAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLNLNQAGDWYGWIETGREAEKGAR
        EILPSPL LNQAGDWYGWIETGREAEKGAR
Subjt:  EILPSPLNLNQAGDWYGWIETGREAEKGAR

XP_023520188.1 dof zinc finger protein DOF3.1-like [Cucurbita pepo subsp. pepo]2.2e-6790.34Show/hide
Query:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI
        MAELGHMDLQDIRSKPWKCPRCDS DTKFCYYNNYN SQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI
Subjt:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEI

Query:  LPSPLNLNQAGDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE
        LPSPL LNQ GD          AEKGARGEGFGSLDHLPTSDETE
Subjt:  LPSPLNLNQAGDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE

TrEMBL top hitse value%identityAlignment
A0A0A0LTJ9 Dof-type domain-containing protein1.4e-3057.97Show/hide
Query:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        D +SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRN+PVGGG RK+K +SK K       R + +  + +  SDL++L SPL 
Subjt:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  L-NQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS
        L NQAGD + W   GRE E G  A  EG   LD LPTS
Subjt:  L-NQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS

A0A1S3BDV3 dof zinc finger protein DOF3.4-like6.6e-3361.31Show/hide
Query:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        D +SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K +S  KPK A     + +S S    SDL++  SPL 
Subjt:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS
        LNQ+GD   W   GRE E G  A  EGFG LDHL TS
Subjt:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS

A0A5D3BGN5 Dof zinc finger protein DOF3.4-like6.6e-3361.31Show/hide
Query:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        D +SKP     +CPRC+SL TKFCYYNNYN SQPRHFCKTCRRYWT+GG+LRNVPVGGG+RK+K +S  KPK A     + +S S    SDL++  SPL 
Subjt:  DIRSKP----WKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS
        LNQ+GD   W   GRE E G  A  EGFG LDHL TS
Subjt:  LNQAGDWYGWIETGREAEKG--ARGEGFGSLDHLPTS

A0A6J1C7U6 dof zinc finger protein DOF5.8-like4.0e-3052.63Show/hide
Query:  DIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSK------SNSWKSDLEILPSP
        D R     CPRC SLDTKFCYYNNYN SQPRH CKTCRRYWTIGG LRN+PVGG  RK+ N+SKLKPK A IV    S+       S+  +SDL   P  
Subjt:  DIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSK------SNSWKSDLEILPSP

Query:  LNLNQAGDWYGWIET-GR----------EAEKGARGEGFGSLDHLPTSDETE
        L+   A D+YGWI++ GR            ++G  GEGFGSLD     D+ +
Subjt:  LNLNQAGDWYGWIET-GR----------EAEKGARGEGFGSLDHLPTSDETE

A0A6J1EE71 dof zinc finger protein 4-like5.0e-6593.08Show/hide
Query:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPK--AAMIVRDSPSSKSNSWKSDL
        M ELGHMDLQDIRSKPWKCPRC S DTKFCYYNNYN SQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNS K KPK  AAMIVRDSPSSKSNSWKSDL
Subjt:  MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPK--AAMIVRDSPSSKSNSWKSDL

Query:  EILPSPLNLNQAGDWYGWIETGREAEKGAR
        EILPSPL LNQAGDWYGWIETGREAEKGAR
Subjt:  EILPSPLNLNQAGDWYGWIETGREAEKGAR

SwissProt top hitse value%identityAlignment
Q8L9V6 Dof zinc finger protein DOF1.14.1e-2454.29Show/hide
Query:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        P KCPRCDS +TKFCYYNNYN +QPRHFCK CRRYWT GG LRNVPVGGG    N+K KN     SS    +++ +   SPSS            P+  N
Subjt:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAG
        L Q G
Subjt:  LNQAG

Q8LDR0 Dof zinc finger protein DOF5.45.4e-2472.22Show/hide
Query:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSS
        KCPRC+SL+TKFCYYNNYN SQPRHFCK CRRYWT GGVLRNVPVGGG RKAK  SK K   +    D P++
Subjt:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSS

Q9FM03 Dof zinc finger protein DOF5.67.0e-2443.88Show/hide
Query:  GHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILP--
        G   L+     P KCPRC+S  TKFCYYNNY+ SQPR+FCKTCRRYWT GG LRN+PVGGG RK K  S     ++      PS+   +  SDL  L   
Subjt:  GHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILP--

Query:  ------SPLNLNQAGDWYGWIETGREAEKGARGEGFGSL
              SPL  +  G   G   T      G     +G L
Subjt:  ------SPLNLNQAGDWYGWIETGREAEKGARGEGFGSL

Q9LSL6 Dof zinc finger protein DOF5.72.0e-2362.2Show/hide
Query:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLE
        KCPRC+S +TKFCYYNNY+ SQPRHFCK+CRRYWT GG LRNVP+GGG RK K S  +KP ++M    S SS    + S +E
Subjt:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLE

Q9ZV33 Dof zinc finger protein DOF2.21.4e-2453.27Show/hide
Query:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRCDS +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGG          GN K+ +SS+ K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LNLNQAG
         NL Q G
Subjt:  LNLNQAG

Arabidopsis top hitse value%identityAlignment
AT1G07640.1 Dof-type zinc finger DNA-binding family protein2.9e-2554.29Show/hide
Query:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        P KCPRCDS +TKFCYYNNYN +QPRHFCK CRRYWT GG LRNVPVGGG    N+K KN     SS    +++ +   SPSS            P+  N
Subjt:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAG
        L Q G
Subjt:  LNQAG

AT1G07640.2 Dof-type zinc finger DNA-binding family protein2.9e-2554.29Show/hide
Query:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        P KCPRCDS +TKFCYYNNYN +QPRHFCK CRRYWT GG LRNVPVGGG    N+K KN     SS    +++ +   SPSS            P+  N
Subjt:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAG
        L Q G
Subjt:  LNQAG

AT1G07640.3 Dof-type zinc finger DNA-binding family protein2.9e-2554.29Show/hide
Query:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN
        P KCPRCDS +TKFCYYNNYN +QPRHFCK CRRYWT GG LRNVPVGGG    N+K KN     SS    +++ +   SPSS            P+  N
Subjt:  PWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGG----NRKAKN-----SSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLN

Query:  LNQAG
        L Q G
Subjt:  LNQAG

AT2G28810.1 Dof-type zinc finger DNA-binding family protein1.0e-2553.27Show/hide
Query:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRCDS +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGG          GN K+ +SS+ K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LNLNQAG
         NL Q G
Subjt:  LNLNQAG

AT2G28810.2 Dof-type zinc finger DNA-binding family protein1.0e-2553.27Show/hide
Query:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP
        KCPRCDS +TKFCY+NNYN +QPRHFCK CRRYWT GG LRNVPVGG          GN K+ +SS+ K   +M+   SP++ SN      S    LP+ 
Subjt:  KCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGG----------GNRKAKNSSKLKPKAAMIVRDSPSSKSN---SWKSDLEILPSP

Query:  LNLNQAG
         NL Q G
Subjt:  LNLNQAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGATTCTCTCGACACCAAATTCTGCTATTACAATAACTACAATTG
CTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTTCTTCGCAACGTTCCTGTTGGCGGTGGAAATCGCAAAGCGAAGAACAGTTCGA
AGCTGAAGCCGAAGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAACTTGAATCAGGCG
GGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACAAGTGATGAAACCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATTAGGGCACATGGATTTGCAAGACATTCGATCCAAGCCATGGAAGTGCCCAAGGTGCGATTCTCTCGACACCAAATTCTGCTATTACAATAACTACAATTG
CTCTCAGCCTCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCATCGGCGGTGTTCTTCGCAACGTTCCTGTTGGCGGTGGAAATCGCAAAGCGAAGAACAGTTCGA
AGCTGAAGCCGAAGGCTGCAATGATCGTGAGAGATTCGCCGTCGTCGAAATCGAATTCGTGGAAGTCCGATTTGGAAATCCTCCCGTCGCCGCTGAACTTGAATCAGGCG
GGTGATTGGTACGGTTGGATTGAGACTGGAAGGGAGGCGGAGAAAGGGGCGAGGGGCGAGGGATTTGGATCGTTGGATCATTTGCCGACAAGTGATGAAACCGAATGA
Protein sequenceShow/hide protein sequence
MAELGHMDLQDIRSKPWKCPRCDSLDTKFCYYNNYNCSQPRHFCKTCRRYWTIGGVLRNVPVGGGNRKAKNSSKLKPKAAMIVRDSPSSKSNSWKSDLEILPSPLNLNQA
GDWYGWIETGREAEKGARGEGFGSLDHLPTSDETE