; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04796 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04796
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSingle-stranded DNA-binding protein
Genome locationCarg_Chr13:9258575..9261556
RNA-Seq ExpressionCarg04796
SyntenyCarg04796
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0006264 - mitochondrial DNA replication (biological process)
GO:0051096 - positive regulation of helicase activity (biological process)
GO:0042645 - mitochondrial nucleoid (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR000424 - Primosome PriB/single-strand DNA-binding
IPR002130 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR011344 - Single-stranded DNA-binding protein
IPR012340 - Nucleic acid-binding, OB-fold
IPR029000 - Cyclophilin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584376.1 Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-18098.8Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
        MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG

Query:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
        QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREVAIRR
Subjt:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR

Query:  SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR
        SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKN+CVPKKALVLQSLTKRAFIDISVDG+PAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR
Subjt:  SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR

Query:  RKDFVKITSNYVQDSGVRSYGVDVELAKRKGMS
        RKDFVKITSNYVQDSGVRSY VDVELAKRKGMS
Subjt:  RKDFVKITSNYVQDSGVRSYGVDVELAKRKGMS

KAG7019962.1 Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-182100Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
        MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG

Query:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
        QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
Subjt:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR

Query:  SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR
        SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR
Subjt:  SGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYR

Query:  RKDFVKITSNYVQDSGVRSYGVDVELAKRKGMS
        RKDFVKITSNYVQDSGVRSYGVDVELAKRKGMS
Subjt:  RKDFVKITSNYVQDSGVRSYGVDVELAKRKGMS

XP_022923669.1 single-stranded DNA-binding protein, mitochondrial-like [Cucurbita moschata]2.7e-11697.8Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
        MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM+LDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG

Query:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
        QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREVAIRR
Subjt:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR

Query:  SGRLVFLGKGEGDVQQSTQSEFKDPFY
        SGRLVFLGKGEGDVQQSTQSEFK   Y
Subjt:  SGRLVFLGKGEGDVQQSTQSEFKDPFY

XP_023000724.1 single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima]5.8e-11193.94Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV
        MTSMAVLSRRLFRS LSNSKASHHHDILPVI SSKNLSFRS+SDIGESSI SDMDL SHSVSNRPSLSP    SSSQTRTIYNRPLENGLDAGIYKAILV
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV

Query:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV
        GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREV
Subjt:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV

Query:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        AIRRSGRLVFLGKGEGDVQQSTQ EFK   Y
Subjt:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

XP_023519718.1 single-stranded DNA-binding protein, mitochondrial-like [Cucurbita pepo subsp. pepo]2.2e-11093.07Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV
        MTSMAVLSRRLFRS LSNSKAS+HHD+LPVI SSKNLSFRS+SDIGESSI SDMDL SHSVSNRPSLSP    SSSQTRTIYNRPLENGLDAGIYKAILV
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV

Query:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV
        GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREV
Subjt:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV

Query:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        AIRRSGRLVFLGKGEGDVQQSTQSEF+   Y
Subjt:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

TrEMBL top hitse value%identityAlignment
A0A0A0LTL6 Uncharacterized protein1.9e-9681.55Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM--DLDSHSVSNRPSLSPSSSQT----RTIYNRPLENGLDAGIYKAI
        MTSM  LSRRL RSLLSNSKASHH+DILPV   + NLSFRS+SDI ES I SD+  +LDS+SV+N+PSLSPSSSQ+    R +YNRPLENGLDAGIYKAI
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM--DLDSHSVSNRPSLSPSSSQT----RTIYNRPLENGLDAGIYKAI

Query:  LVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIR
        LVG+VGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYP RLG++VMKHVVPGSILYLEGNLETKIFTD +TGLVRRIR
Subjt:  LVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIR

Query:  EVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        EVAIR +GRLVFLGKGEG+ Q+ST SEF+   Y
Subjt:  EVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

A0A1S3C3D2 single-stranded DNA-binding protein, mitochondrial2.0e-9378.97Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM--DLDSHSVSNRPSLSPSSS----QTRTIYNRPLENGLDAGIYKAI
        MTS   LSRRL RSLLSNSKASHHHDILPV   + NLSFRS+SDI ES I SD+  +LDS+SV+N+PS SPSSS    Q+R +Y+RPLENGLDAGI+KAI
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM--DLDSHSVSNRPSLSPSSS----QTRTIYNRPLENGLDAGIYKAI

Query:  LVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIR
        LVG+VGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLG++VMKH VPGSI+YLEGNLETKIFTD +TGLVRRIR
Subjt:  LVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIR

Query:  EVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        EVAIR +GRLVFLGK EG+ Q+ST SE +   Y
Subjt:  EVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

A0A6J1C717 single-stranded DNA-binding protein, mitochondrial1.0e-9783.12Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSS----QTRTIYNRPLENGLDAGIYKAILV
        MTSMA LSR+L RSLLSNS+ASHH + L +   + N SFRS S+IG+SSI SDMD DSHSV+NRPS+SPSSS    QTR IYNRPLENGLDAGIYKAILV
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSS----QTRTIYNRPLENGLDAGIYKAILV

Query:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV
        GQ GQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVS+YPQRLG++VMKHVVPGSILYLEGNLETKIFTD ITGLVRRIREV
Subjt:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV

Query:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        AIRR+GRLVFLG G G+VQQSTQSEFK   Y
Subjt:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

A0A6J1E721 single-stranded DNA-binding protein, mitochondrial-like1.3e-11697.8Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
        MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDM+LDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG

Query:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
        QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREVAIRR
Subjt:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR

Query:  SGRLVFLGKGEGDVQQSTQSEFKDPFY
        SGRLVFLGKGEGDVQQSTQSEFK   Y
Subjt:  SGRLVFLGKGEGDVQQSTQSEFKDPFY

A0A6J1KGM8 single-stranded DNA-binding protein, mitochondrial2.8e-11193.94Show/hide
Query:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV
        MTSMAVLSRRLFRS LSNSKASHHHDILPVI SSKNLSFRS+SDIGESSI SDMDL SHSVSNRPSLSP    SSSQTRTIYNRPLENGLDAGIYKAILV
Subjt:  MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSP----SSSQTRTIYNRPLENGLDAGIYKAILV

Query:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV
        GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDS TGLVRRIREV
Subjt:  GQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREV

Query:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY
        AIRRSGRLVFLGKGEGDVQQSTQ EFK   Y
Subjt:  AIRRSGRLVFLGKGEGDVQQSTQSEFKDPFY

SwissProt top hitse value%identityAlignment
F4HTT6 Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic1.9e-2472.97Show/hide
Query:  TKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQDSGVRSYGVDVELA
        TK+AFID+S+DGEP GRIIIGLYGDD  AG ARF+++VSG AGI+YRRKDFVKI   YVQ  G+RSYGVD E A
Subjt:  TKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQDSGVRSYGVDVELA

Q84J78 Single-stranded DNA-binding protein, mitochondrial4.0e-2233.16Show/hide
Query:  SKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVGQSPLQKQLKSGRTVTLLS
        SK      I P+  S++  S +S    G    G + D +  +V+ RP L P     R  +          G+++AI+ G+VGQ+PLQK L++GRTVT+ +
Subjt:  SKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVGQSPLQKQLKSGRTVTLLS

Query:  VGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRRSGRLVFLGKGE
        VGTGG+ + R   A  +P+        QWHR++++ + LG   ++ +   S +Y+EG++ET+++ DSI+  V+ I E+ +RR G++  +  GE
Subjt:  VGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRRSGRLVFLGKGE

Q8D254 Single-stranded DNA-binding protein1.1e-0833.33Show/hide
Query:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG
        GI K IL+G +GQ P  + + +G  +T LS+ T     N R     E +E       +WHRV ++  +L +V  +++  GS +Y+EGNL+T+ + D   G
Subjt:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG

Query:  LVRRIREVAIRRSGRLVFLG
          R I E+ +  +G +  LG
Subjt:  LVRRIREVAIRRSGRLVFLG

Q8K933 Single-stranded DNA-binding protein1.5e-0825.68Show/hide
Query:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG
        G+ K IL+G +GQ P  + + +G  V  +++ T     ++    N+E  E        WHR+ ++  +L ++  +++  GS +Y+EG+L+T+ + D   G
Subjt:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG

Query:  LVRRIREVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKA
        L R   EV +   G +  LG    +    T +E  +   T K+ +  +
Subjt:  LVRRIREVAIRRSGRLVFLGKGEGDVQQSTQSEFKDPFYTPKLRLQKA

Q9RHF4 Single-stranded DNA-binding protein 21.1e-0831.67Show/hide
Query:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG
        G+ K ILVG +GQ P  + + +G  V  LS+ T     +++    +E  E        WHRV +Y  +L ++  +++  GS +Y+EG L T+ +TD  +G
Subjt:  GIYKAILVGQVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITG

Query:  LVRRIREVAIRRSGRLVFLG
        + +   EV + +SG +  LG
Subjt:  LVRRIREVAIRRSGRLVFLG

Arabidopsis top hitse value%identityAlignment
AT1G74070.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein1.4e-2572.97Show/hide
Query:  TKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQDSGVRSYGVDVELA
        TK+AFID+S+DGEP GRIIIGLYGDD  AG ARF+++VSG AGI+YRRKDFVKI   YVQ  G+RSYGVD E A
Subjt:  TKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQDSGVRSYGVDVELA

AT3G18580.1 Nucleic acid-binding, OB-fold-like protein1.3e-6560.79Show/hide
Query:  SMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPS--LSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG
        SMA LSRRL+RSLLSN + S          +S +    +I+    S   SD D     +  + S  +S  S + R +  RPLENGLD+GI+KAILVGQVG
Subjt:  SMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPS--LSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVG

Query:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR
        Q PLQK+LKSGRTVTL SVGTGGIRNNRRPL NE+PREYA+R AVQWHRVS+YP+RL D+V+K+V PG+++YLEGNLETKIFTD +TGLVRRIREVAIRR
Subjt:  QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRR

Query:  SGRLVFLGKGEGDVQQSTQSEFKDPFY
        +GR+VFLGK  GD+QQ + +E +   Y
Subjt:  SGRLVFLGKGEGDVQQSTQSEFKDPFY

AT4G11060.1 mitochondrially targeted single-stranded DNA binding protein2.8e-2333.16Show/hide
Query:  SKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVGQSPLQKQLKSGRTVTLLS
        SK      I P+  S++  S +S    G    G + D +  +V+ RP L P     R  +          G+++AI+ G+VGQ+PLQK L++GRTVT+ +
Subjt:  SKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVGQSPLQKQLKSGRTVTLLS

Query:  VGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRRSGRLVFLGKGE
        VGTGG+ + R   A  +P+        QWHR++++ + LG   ++ +   S +Y+EG++ET+++ DSI+  V+ I E+ +RR G++  +  GE
Subjt:  VGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRRSGRLVFLGKGE

AT5G13120.1 cyclophilin 20-27.0e-0633.98Show/hide
Query:  PFYTPKLRLQKAWMK-NH---CVPKKALVL----QSLTKRAFIDISVD---GEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQ
        PF    L L  ++ K NH    V   A V+      +T + + DISV    G+ AGRI+IGLYGDD    V  F  L +G  G  Y+   F ++  +++ 
Subjt:  PFYTPKLRLQKAWMK-NH---CVPKKALVL----QSLTKRAFIDISVD---GEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQ

Query:  DSG
          G
Subjt:  DSG

AT5G13120.2 cyclophilin 20-27.0e-0633.98Show/hide
Query:  PFYTPKLRLQKAWMK-NH---CVPKKALVL----QSLTKRAFIDISVD---GEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQ
        PF    L L  ++ K NH    V   A V+      +T + + DISV    G+ AGRI+IGLYGDD    V  F  L +G  G  Y+   F ++  +++ 
Subjt:  PFYTPKLRLQKAWMK-NH---CVPKKALVL----QSLTKRAFIDISVD---GEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQ

Query:  DSG
          G
Subjt:  DSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCCATGGCTGTTCTGTCGAGAAGGCTCTTTCGTTCTCTGCTGTCGAATTCTAAAGCTTCTCATCATCACGACATCCTACCCGTGATCTGTAGCTCGAAGAACCT
TTCCTTCCGCTCGATCTCAGACATCGGCGAGTCCAGTATTGGCTCGGACATGGACTTGGACTCACATTCAGTATCTAATCGACCTTCTCTCTCACCGTCCTCGTCCCAGA
CGAGAACCATCTATAATCGACCTCTGGAAAATGGCCTTGATGCTGGCATTTATAAGGCTATATTGGTGGGGCAGGTGGGGCAAAGTCCATTGCAGAAGCAGCTGAAAAGT
GGGAGAACGGTGACGCTGTTATCAGTTGGTACGGGCGGTATTCGTAATAATCGGAGACCCTTGGCTAATGAGGAACCCAGAGAGTATGCGAATCGGTGCGCAGTTCAGTG
GCATCGGGTTTCGATTTATCCTCAGAGACTGGGCGATGTTGTCATGAAGCATGTTGTGCCCGGTTCAATTTTATATTTGGAGGGGAATTTAGAGACCAAAATCTTCACTG
ATTCAATCACTGGTCTTGTTCGACGCATTAGAGAAGTTGCCATTCGCCGCAGTGGCCGCCTGGTATTTTTGGGCAAGGGAGAAGGCGATGTTCAGCAGTCCACTCAATCA
GAATTCAAAGACCCATTTTACACTCCAAAGCTGAGGCTGCAGAAAGCTTGGATGAAGAATCATTGTGTCCCAAAGAAGGCCCTCGTTTTACAGAGCCTCACCAAGCGTGC
ATTTATTGATATCTCCGTTGATGGAGAGCCTGCTGGTCGCATTATCATTGGCCTTTATGGTGACGACGCCCTTGCAGGAGTTGCTAGGTTTACTAACCTTGTAAGTGGAG
CTGCAGGGATTTCTTACAGAAGAAAAGACTTTGTAAAGATCACATCAAACTATGTTCAGGACAGTGGAGTGAGATCTTACGGTGTGGATGTTGAGCTCGCAAAGAGGAAG
GGAATGAGTTAG
mRNA sequenceShow/hide mRNA sequence
TAGGGTTTAAGCCATTTCGCTGAATTTCTGCATTTTTCTTTGGATTGGCAACTGTGAAGACGATGACCTCCATGGCTGTTCTGTCGAGAAGGCTCTTTCGTTCTCTGCTG
TCGAATTCTAAAGCTTCTCATCATCACGACATCCTACCCGTGATCTGTAGCTCGAAGAACCTTTCCTTCCGCTCGATCTCAGACATCGGCGAGTCCAGTATTGGCTCGGA
CATGGACTTGGACTCACATTCAGTATCTAATCGACCTTCTCTCTCACCGTCCTCGTCCCAGACGAGAACCATCTATAATCGACCTCTGGAAAATGGCCTTGATGCTGGCA
TTTATAAGGCTATATTGGTGGGGCAGGTGGGGCAAAGTCCATTGCAGAAGCAGCTGAAAAGTGGGAGAACGGTGACGCTGTTATCAGTTGGTACGGGCGGTATTCGTAAT
AATCGGAGACCCTTGGCTAATGAGGAACCCAGAGAGTATGCGAATCGGTGCGCAGTTCAGTGGCATCGGGTTTCGATTTATCCTCAGAGACTGGGCGATGTTGTCATGAA
GCATGTTGTGCCCGGTTCAATTTTATATTTGGAGGGGAATTTAGAGACCAAAATCTTCACTGATTCAATCACTGGTCTTGTTCGACGCATTAGAGAAGTTGCCATTCGCC
GCAGTGGCCGCCTGGTATTTTTGGGCAAGGGAGAAGGCGATGTTCAGCAGTCCACTCAATCAGAATTCAAAGACCCATTTTACACTCCAAAGCTGAGGCTGCAGAAAGCT
TGGATGAAGAATCATTGTGTCCCAAAGAAGGCCCTCGTTTTACAGAGCCTCACCAAGCGTGCATTTATTGATATCTCCGTTGATGGAGAGCCTGCTGGTCGCATTATCAT
TGGCCTTTATGGTGACGACGCCCTTGCAGGAGTTGCTAGGTTTACTAACCTTGTAAGTGGAGCTGCAGGGATTTCTTACAGAAGAAAAGACTTTGTAAAGATCACATCAA
ACTATGTTCAGGACAGTGGAGTGAGATCTTACGGTGTGGATGTTGAGCTCGCAAAGAGGAAGGGAATGAGTTAG
Protein sequenceShow/hide protein sequence
MTSMAVLSRRLFRSLLSNSKASHHHDILPVICSSKNLSFRSISDIGESSIGSDMDLDSHSVSNRPSLSPSSSQTRTIYNRPLENGLDAGIYKAILVGQVGQSPLQKQLKS
GRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGDVVMKHVVPGSILYLEGNLETKIFTDSITGLVRRIREVAIRRSGRLVFLGKGEGDVQQSTQS
EFKDPFYTPKLRLQKAWMKNHCVPKKALVLQSLTKRAFIDISVDGEPAGRIIIGLYGDDALAGVARFTNLVSGAAGISYRRKDFVKITSNYVQDSGVRSYGVDVELAKRK
GMS