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Carg04828 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04828
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationCarg_Chr13:9070192..9070464
RNA-Seq ExpressionCarg04828
SyntenyCarg04828
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572947.1 hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3590Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAVS++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFV SPNAR+VANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

KAG7019930.1 hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-40100Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

XP_004137484.1 non-specific lipid-transfer protein 2 [Cucumis sativus]6.3e-3688.89Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIA+SI+VMFM  E+++AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

XP_022923700.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]3.5e-3998.89Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

XP_023000838.1 probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]7.9e-3997.78Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAV+ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

TrEMBL top hitse value%identityAlignment
A0A0A0LVT5 AAI domain-containing protein3.0e-3688.89Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIA+SI+VMFM  E+++AVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL+KFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

A0A5D3BJV8 Non-specific lipid-transfer protein 22.0e-3586.67Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIA+SI+VMFMM E+S+AVTCSP+QLSSCVSAITSSVPPS LCCSKIKEQ+PCLCKYMQNPTL+KFVASPNA+KVA+TC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

A0A6J1ECM2 non-specific lipid-transfer protein 2-like1.7e-3998.89Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

A0A6J1KNT4 probable non-specific lipid-transfer protein AKCS93.8e-3997.78Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKASQIAV+ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC TPFPKC
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

V7C3M6 AAI domain-containing protein1.8e-2875Show/hide
Query:  MKASQIAVSILVMFMMAE--VSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MKA+ IA+  LV+ ++AE  VS+AVTCSP+QLSSCVSAITSS PPS LCCSKIKEQKPCLCKY++NP L+KFV SPNARKVA+TC TPFP+C
Subjt:  MKASQIAVSILVMFMMAE--VSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

SwissProt top hitse value%identityAlignment
P82353 Non-specific lipid-transfer protein 22.3e-1755.88Show/hide
Query:  VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        VTCSP+QLS C+  I S  P    CC K++EQ+PCLC Y++NP+LR++V SPNARK+A+ C  P P+C
Subjt:  VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

P82900 Non-specific lipid-transfer protein 2G2.8e-0735Show/hide
Query:  LVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        LV+   A       C   QL+ C SAI S   PS  CC  ++ Q+ C C+Y ++PT  +++ SP+AR    +C    P C
Subjt:  LVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

P82901 Non-specific lipid-transfer protein 2P1.2e-0839.39Show/hide
Query:  CSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +C    P C
Subjt:  CSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

P86809 Non-specific lipid-transfer protein 22.8e-1558.33Show/hide
Query:  TCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC
        TCS +QLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P L+ +V SP ARK A++C
Subjt:  TCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTC

Q43681 Probable non-specific lipid-transfer protein AKCS91.5e-1648.39Show/hide
Query:  MKASQI-AVSILVMFM--MAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        MK S + AV ++ +F+  +  V+ AVTC+P +LSSCV AIT    PS  CCSK+K Q+PCLC Y++NP+L+++V SP A+KV + C   +P C
Subjt:  MKASQI-AVSILVMFM--MAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.6e-2454.44Show/hide
Query:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        M  S +A++  ++ +   V+  VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC YM+NPTLR++V+SPNARKV+N+C  P P C
Subjt:  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-1544.44Show/hide
Query:  ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        IL++     V+    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  + F+ SPNA+ +A  C  P+PKC
Subjt:  ILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-2457.47Show/hide
Query:  SQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        S  A++ +++ ++A  + AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+NP+LR+FV++PNARKV+ +C  P P+C
Subjt:  SQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-1551.43Show/hide
Query:  VAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        V VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK    C   +P C
Subjt:  VAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.0e-1548.53Show/hide
Query:  VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC
        VTC  +QLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA+K   TC  P+P C
Subjt:  VTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCATCACAGATAGCAGTGAGCATATTGGTGATGTTTATGATGGCGGAGGTCTCAGTGGCAGTGACATGCAGTCCACTGCAACTGAGCTCCTGTGTGAGTGCAAT
CACATCTTCAGTTCCGCCATCTAAGCTCTGCTGCTCAAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAGGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGTAACTCCATTTCCCAAGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCATCACAGATAGCAGTGAGCATATTGGTGATGTTTATGATGGCGGAGGTCTCAGTGGCAGTGACATGCAGTCCACTGCAACTGAGCTCCTGTGTGAGTGCAAT
CACATCTTCAGTTCCGCCATCTAAGCTCTGCTGCTCAAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAGGAAGTTTGTGGCCTCTC
CCAATGCCAGGAAAGTTGCTAACACTTGTGTAACTCCATTTCCCAAGTGCTAG
Protein sequenceShow/hide protein sequence
MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLRKFVASPNARKVANTCVTPFPKC