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Carg04829 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04829
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein S24/S35, mitochondrial
Genome locationCarg_Chr13:9065072..9066247
RNA-Seq ExpressionCarg04829
SyntenyCarg04829
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584340.1 hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]3.1e-7898.77Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNST+IENKDSLVDDDISNEELKRKIDRFYEGD+ESLPAIFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

KAG7019929.1 hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-79100Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

XP_022924024.1 uncharacterized protein LOC111431572 [Cucurbita moschata]3.5e-7796.91Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVF ACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDD+SNEELKRKIDRFYEGD+ESLP IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        KRKLSGKHGDADDELMKEIRQR+PGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

XP_023000953.1 uncharacterized protein LOC111495236 [Cucurbita maxima]8.8e-7393.75Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVFAACSRRVSI PLLQTLRSGPLLP FSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDD +SNEELKRKIDRFYEGD+ESLP IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDR
        KRKLSGKHGDADDELMKEI QRMPGEVEDFKDEEYDSDLSG+LNE+DEEM+EDSSEEEDR
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDR

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]1.6e-7493.21Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVF  CSRRVSISPLLQTLRSGPLLP FSVSI+SQSRCYS+GNDKYNGLNSTTIENKDSLVDDD+SNEELKRKIDRFYEGD+ESLP IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNE+DEEM+ED SEEEDRRV
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

TrEMBL top hitse value%identityAlignment
A0A1S3CEX3 uncharacterized protein LOC1034999292.0e-4669.33Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYE-GDIESLPAIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RS PLL  FSV      RCYSSGNDKYN LNST  +NKDSLVDDD+S EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYE-GDIESLPAIFEAI

Query:  LKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        LKRKLSGKH DADDELMKEIRQRMPGE+EDFK EEYDS+L+ +            SEEED+R+
Subjt:  LKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

A0A5D3BIA4 Uncharacterized protein2.0e-4669.33Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYE-GDIESLPAIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RS PLL  FSV      RCYSSGNDKYN LNST  +NKDSLVDDD+S EELKRKID+FYE GD +SLP IFEAI
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYE-GDIESLPAIFEAI

Query:  LKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        LKRKLSGKH DADDELMKEIRQRMPGE+EDFK EEYDS+L+ +            SEEED+R+
Subjt:  LKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

A0A6J1C5J6 uncharacterized protein LOC1110085966.4e-4567.07Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        M RA+W AVF   +R VSISP LQT  SG     F+V  S Q RCYSS NDKYNGLNSTT +N  S+VDDD+S EELKRKID+FYEGD+ESLP+IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR
        KRKLSGKH  ADDELMKEIRQRMPG++EDFKD+E  SDL+G   E+DEE+ + S       SEEEDR
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDS-------SEEEDR

A0A6J1E804 uncharacterized protein LOC1114315721.7e-7796.91Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVF ACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDD+SNEELKRKIDRFYEGD+ESLP IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
        KRKLSGKHGDADDELMKEIRQR+PGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV

A0A6J1KP40 uncharacterized protein LOC1114952364.3e-7393.75Show/hide
Query:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL
        MKRAIWGAVFAACSRRVSI PLLQTLRSGPLLP FSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDD +SNEELKRKIDRFYEGD+ESLP IFEAIL
Subjt:  MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAIL

Query:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDR
        KRKLSGKHGDADDELMKEI QRMPGEVEDFKDEEYDSDLSG+LNE+DEEM+EDSSEEEDR
Subjt:  KRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown2.6e-0630.77Show/hide
Query:  LLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILKRKLSGKHGDADDELMKEIRQRMPGEVED
        ++P F  +I S+   +SS +D   G  +          ++ +S EELK++I  F  +G+ +++P +FEA++ RKLSGKH D+DDE+M  +R+    +   
Subjt:  LLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILKRKLSGKHGDADDELMKEIRQRMPGEVED

Query:  FKDEEYDSDLSGELNESDEEMKEDSSEEED
          D + D +  G  + SD +++ D   + D
Subjt:  FKDEEYDSDLSGELNESDEEMKEDSSEEED

AT1G73770.2 FUNCTIONS IN: molecular_function unknown2.6e-0630.77Show/hide
Query:  LLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILKRKLSGKHGDADDELMKEIRQRMPGEVED
        ++P F  +I S+   +SS +D   G  +          ++ +S EELK++I  F  +G+ +++P +FEA++ RKLSGKH D+DDE+M  +R+    +   
Subjt:  LLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILKRKLSGKHGDADDELMKEIRQRMPGEVED

Query:  FKDEEYDSDLSGELNESDEEMKEDSSEEED
          D + D +  G  + SD +++ D   + D
Subjt:  FKDEEYDSDLSGELNESDEEMKEDSSEEED

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial1.1e-1235.1Show/hide
Query:  CSRRVSISPLL--QTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILK
        C+RR+ +SP +  Q   + P L   +   + + R +SS     +G NSTT           K  LV +D+SN+ELK +I++++ EG+ ++LP + EA+L+
Subjt:  CSRRVSISPLL--QTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILK

Query:  RKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE
        R+L  KH + DDEL+++I + +P + +D KDE+++SD   E + +DEE+++
Subjt:  RKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial1.1e-1235.1Show/hide
Query:  CSRRVSISPLL--QTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILK
        C+RR+ +SP +  Q   + P L   +   + + R +SS     +G NSTT           K  LV +D+SN+ELK +I++++ EG+ ++LP + EA+L+
Subjt:  CSRRVSISPLL--QTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDRFY-EGDIESLPAIFEAILK

Query:  RKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE
        R+L  KH + DDEL+++I + +P + +D KDE+++SD   E + +DEE+++
Subjt:  RKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial1.4e-1236.08Show/hide
Query:  GAVF---AACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDR-FYEGDIESLPA
        GA+F   + C+RR+ +S  +    + P L   +     + R +SS     +G NSTT          +K  LV +D+SN+ELK +ID+ F EG+ ++LP 
Subjt:  GAVF---AACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTI--------ENKDSLVDDDISNEELKRKIDR-FYEGDIESLPA

Query:  IFEAILKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE
        + EA+L+R+L  KH + DDELM++I + +P + +D KDE+++SD   E + +DEE+++
Subjt:  IFEAILKRKLSGKHGDADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGCTATATGGGGAGCTGTCTTCGCTGCCTGTTCTCGGAGGGTTTCCATCTCTCCTCTGCTTCAAACCTTGCGCTCTGGTCCATTACTACCTTCATTTTCCGT
TTCGATTTCGTCCCAATCGCGATGCTACTCGTCCGGGAATGACAAGTATAATGGATTGAACTCAACAACGATTGAAAACAAGGATTCTCTCGTCGACGATGATATCAGTA
ACGAAGAGCTGAAGAGGAAAATTGATAGATTTTACGAGGGTGACATCGAGTCCTTACCAGCAATTTTTGAAGCAATTTTGAAGAGGAAGCTATCAGGTAAGCACGGAGAT
GCTGATGATGAGCTGATGAAGGAAATTCGGCAGCGAATGCCTGGAGAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTTAAGTGGTGAGTTGAATGAAAGTGA
TGAAGAAATGAAGGAGGATTCCAGTGAGGAAGAAGATAGAAGAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGAGCTATATGGGGAGCTGTCTTCGCTGCCTGTTCTCGGAGGGTTTCCATCTCTCCTCTGCTTCAAACCTTGCGCTCTGGTCCATTACTACCTTCATTTTCCGT
TTCGATTTCGTCCCAATCGCGATGCTACTCGTCCGGGAATGACAAGTATAATGGATTGAACTCAACAACGATTGAAAACAAGGATTCTCTCGTCGACGATGATATCAGTA
ACGAAGAGCTGAAGAGGAAAATTGATAGATTTTACGAGGGTGACATCGAGTCCTTACCAGCAATTTTTGAAGCAATTTTGAAGAGGAAGCTATCAGGTAAGCACGGAGAT
GCTGATGATGAGCTGATGAAGGAAATTCGGCAGCGAATGCCTGGAGAAGTTGAAGATTTTAAAGATGAAGAATATGATTCAGATTTAAGTGGTGAGTTGAATGAAAGTGA
TGAAGAAATGAAGGAGGATTCCAGTGAGGAAGAAGATAGAAGAGTATAA
Protein sequenceShow/hide protein sequence
MKRAIWGAVFAACSRRVSISPLLQTLRSGPLLPSFSVSISSQSRCYSSGNDKYNGLNSTTIENKDSLVDDDISNEELKRKIDRFYEGDIESLPAIFEAILKRKLSGKHGD
ADDELMKEIRQRMPGEVEDFKDEEYDSDLSGELNESDEEMKEDSSEEEDRRV