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Carg04867 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04867
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr13:8855237..8857878
RNA-Seq ExpressionCarg04867
SyntenyCarg04867
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572983.1 hypothetical protein SDJN03_26870, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0839.47Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + +    V     +N   S+Q        +TLAATDGAS+L SLILK  S +       
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------

Query:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
            SL G      +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
KAG7012166.1 hypothetical protein SDJN02_24918 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-0839.47Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + +    V     +N   S+Q        +TLAATDGAS+L SLILK  S +       
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------

Query:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
            SL G      +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
TYJ99057.1 uncharacterized protein E5676_scaffold248G002610 [Cucumis melo var. makuwa]3.9e-0850Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + A    V      N   S+Q        +TLAATDGAS+LQSLILK  S ++++
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
XP_016899317.1 PREDICTED: uncharacterized protein LOC103504561 isoform X3 [Cucumis melo]1.2e-0942.55Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLLGHYL
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + A    V      N   S+Q        +TLAATDGAS+LQSLILK +  +S  G   
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLLGHYL

Query:  GRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
           +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  GRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
XP_038893597.1 uncharacterized protein LOC120082484 [Benincasa hispida]7.9e-0950Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
        RGWRPSYRD LL+VRKK+  +   + S  DLEAEIFLHL  + A    V     +N   S+Q        +TLAATDGAS+LQSLILK  S ++++
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
TrEMBL top hitse value%identityAlignment
A0A1S4DTI9 uncharacterized protein LOC103504561 isoform X35.9e-1042.55Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLLGHYL
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + A    V      N   S+Q        +TLAATDGAS+LQSLILK +  +S  G   
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLLGHYL

Query:  GRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
           +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  GRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
A0A5D3BIW0 Uncharacterized protein1.9e-0850Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + A    V      N   S+Q        +TLAATDGAS+LQSLILK  S ++++
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCVSLL
A0A6J1GRP6 uncharacterized protein LOC111456898 isoform X21.9e-0839.47Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + +    V     +N   S+Q        +TLAATDGAS+L SLILK  S +       
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------

Query:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
            SL G      +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
A0A6J1GRX8 uncharacterized protein LOC111456898 isoform X41.9e-0839.47Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + +    V     +N   S+Q        +TLAATDGAS+L SLILK  S +       
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------

Query:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
            SL G      +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
A0A6J1GT80 uncharacterized protein LOC111456898 isoform X11.9e-0839.47Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------
        RGWRPSYRD LL+VRKK+      + S  DLEAEIFLHL  + +    V     +N   S+Q        +TLAATDGAS+L SLILK  S +       
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQ-------GETLAATDGASNLQSLILKLSSCV-------

Query:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
            SL G      +N +   E+ +K  +        R + L   +GLAGAA
Subjt:  ----SLLGHYLGRCSNKRPTIELKRKSSK--------RYSFLQFGQGLAGAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73470.1 unknown protein6.2e-0456.41Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL
        RGWRPSYR+ LL+VR  +     +Q    DLEAEIFL+L
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL
AT1G73470.2 unknown protein6.2e-0456.41Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL
        RGWRPSYR+ LL+VR  +     +Q    DLEAEIFL+L
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL
AT1G73470.3 unknown protein6.2e-0456.41Show/hide
Query:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL
        RGWRPSYR+ LL+VR  +     +Q    DLEAEIFL+L
Subjt:  RGWRPSYRDALLSVRKKVKRSLLNQ-SFGDLEAEIFLHL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTTGTGGGTTGTGCCAATGCTTCCAATCCAAGAAATGGCCAAGGGGTTGGAGACCATCTTATAGAGATGCATTGCTTTCAGTGAGAAAAAAAGTTAAACGTTC
CTTGCTCAACCAATCATTTGGAGACCTTGAAGCAGAAATCTTTCTTCATTTGTTCCTGCAAGTTGCATACATGAATCAAGTGCTGTGTACGTTGTATACAAATTGGACTC
AATCTGTGCAAGGTGAAACTTTAGCAGCTACAGATGGAGCATCTAACCTGCAATCCTTGATATTAAAGCTTTCCTCTTGTGTCAGCTTGCTAGGACATTATCTGGGAAGG
TGTTCCAACAAGCGGCCAACCATTGAATTAAAAAGGAAATCATCAAAAAGGTACTCGTTCTTGCAATTTGGACAGGGTCTTGCTGGTGCTGCTTTA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTTGTGGGTTGTGCCAATGCTTCCAATCCAAGAAATGGCCAAGGGGTTGGAGACCATCTTATAGAGATGCATTGCTTTCAGTGAGAAAAAAAGTTAAACGTTC
CTTGCTCAACCAATCATTTGGAGACCTTGAAGCAGAAATCTTTCTTCATTTGTTCCTGCAAGTTGCATACATGAATCAAGTGCTGTGTACGTTGTATACAAATTGGACTC
AATCTGTGCAAGGTGAAACTTTAGCAGCTACAGATGGAGCATCTAACCTGCAATCCTTGATATTAAAGCTTTCCTCTTGTGTCAGCTTGCTAGGACATTATCTGGGAAGG
TGTTCCAACAAGCGGCCAACCATTGAATTAAAAAGGAAATCATCAAAAAGGTACTCGTTCTTGCAATTTGGACAGGGTCTTGCTGGTGCTGCTTTA
Protein sequenceShow/hide protein sequence
MSICGLCQCFQSKKWPRGWRPSYRDALLSVRKKVKRSLLNQSFGDLEAEIFLHLFLQVAYMNQVLCTLYTNWTQSVQGETLAATDGASNLQSLILKLSSCVSLLGHYLGR
CSNKRPTIELKRKSSKRYSFLQFGQGLAGAAL