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Carg04948 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04948
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHistone H3.2
Genome locationCarg_Chr08:611869..612751
RNA-Seq ExpressionCarg04948
SyntenyCarg04948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025319.1 hypothetical protein SDJN02_11814, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-26100Show/hide
Query:  MYCPQIETAQSSNSFLPAPHSRATALNFESMARAKHPTQRNSNRKPSVAGASPSSSAAPSTVSLSRNL
        MYCPQIETAQSSNSFLPAPHSRATALNFESMARAKHPTQRNSNRKPSVAGASPSSSAAPSTVSLSRNL
Subjt:  MYCPQIETAQSSNSFLPAPHSRATALNFESMARAKHPTQRNSNRKPSVAGASPSSSAAPSTVSLSRNL
XP_022959605.1 histone H3-like centromeric protein HTR12 [Cucurbita moschata]3.3e-05100Show/hide
Query:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
        MARAKHPTQRNSNRKPSVAGASPSSSAAPST
Subjt:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
TrEMBL top hitse value%identityAlignment
A0A6J1H6R9 Histone H3.21.6e-05100Show/hide
Query:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
        MARAKHPTQRNSNRKPSVAGASPSSSAAPST
Subjt:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
A0A6J1KTZ4 Histone H3.21.6e-05100Show/hide
Query:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
        MARAKHPTQRNSNRKPSVAGASPSSSAAPST
Subjt:  MARAKHPTQRNSNRKPSVAGASPSSSAAPST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGCCCCCAAATTGAAACAGCGCAGAGCTCCAATTCCTTTCTGCCTGCTCCTCATTCTCGCGCTACTGCTCTTAATTTTGAATCAATGGCGCGAGCAAAGCATCC
AACCCAACGGAACTCTAATCGCAAGCCATCAGTTGCCGGAGCTTCACCGTCTTCCTCAGCTGCGCCGTCGACGGTATCACTTTCCCGTAATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGCCCCCAAATTGAAACAGCGCAGAGCTCCAATTCCTTTCTGCCTGCTCCTCATTCTCGCGCTACTGCTCTTAATTTTGAATCAATGGCGCGAGCAAAGCATCC
AACCCAACGGAACTCTAATCGCAAGCCATCAGTTGCCGGAGCTTCACCGTCTTCCTCAGCTGCGCCGTCGACGGTATCACTTTCCCGTAATTTGTGACAATGTTTAGCAT
TTCGTGAATGTTTGCGCCATTTTTATGTTGTTTGATTATGTATGATGGAAAAGATGTTAGGAAAATTTCAGTGTATGGGTTTGTGAAGTCTGGTTTTAGCTGATACGAGG
ACTTAAGAATTTTGGAAGATGAGAATGTTGCCATTGCATGAATCTTTCTTTGTATCTTGCTGAGAAAACAGTGGAATGAGGGAATAACTTATCAAATCTTTGTCCTGTCG
ATTTTTGCCACTGTTTTATGTAGCAAATGTGTGATTCTTTCATTTTTTGCTCGAGAGAAATTATAGACCTTTTATAGATCCTTTGTCTCATTTTAGGCTTTGGTGGCTAA
GGCCTTTTGTACTTATGAGCTAGTTTTGGTTCTTTTGTAT
Protein sequenceShow/hide protein sequence
MYCPQIETAQSSNSFLPAPHSRATALNFESMARAKHPTQRNSNRKPSVAGASPSSSAAPSTVSLSRNL