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Carg04963 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04963
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFiber protein fb11
Genome locationCarg_Chr08:715317..718936
RNA-Seq ExpressionCarg04963
SyntenyCarg04963
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459762.1 PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo]5.6e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCIIGGIGLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
XP_022958795.1 uncharacterized protein LOC111459960 [Cucurbita moschata]7.3e-2393.65Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDS+EASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
XP_022959928.1 uncharacterized protein LOC111460833 [Cucurbita moschata]1.7e-24100Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]9.5e-2392.06Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGG+GLFLPAVVRPILDS+EASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
XP_027115476.1 uncharacterized protein LOC113733330 [Coffea arabica]7.3e-2393.65Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDSFE+SKQVPQPVLSDVVA MTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
TrEMBL top hitse value%identityAlignment
A0A068UM29 Uncharacterized protein3.5e-2393.65Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASC+IGGIGLFLPAVVRPILDSFE+SKQVPQPVLSDVVA MTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
A0A1S3CAX6 uncharacterized protein LOC1034987992.7e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCIIGGIGLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
A0A6J1H9H3 uncharacterized protein LOC1114608338.4e-25100Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
A0A6J1L1A7 uncharacterized protein LOC1114981908.4e-25100Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
E5GCM8 Fiber protein fb112.7e-2395.24Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCIIGGIGLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein2.2e-2279.37Show/hide
Query:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
        MPVMEKL+MFV QEPVV ASC+IGG+GLFLPAVVRPILDS EASKQV  P L+DV+A +TGKK
Subjt:  MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCTGTGGTGACTGCATCGTGTATCATCGGTGGAATTGGTCTCTTCCTTCCAGCCGTTGTAAGGCCAAT
TCTGGATTCCTTTGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
AGAAGATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCTGTGGTGACTGCATCGTGTATCATCGGTGGAATTGGTCTCTTCCTTCCAGCCGTTGTAAGG
CCAATTCTGGATTCCTTTGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAGGGATGATCGATCTCAGCAACACA
AGAAGGATTGTTCTTAATGGATCATTGTTTTTTTTTCTTAATCAAATTTCCTGCTCTTCTGCCGTAAAATAAGCCCTCTACAATCTAATCGGATATCAAGTTTGATAGCG
TAGCCATTTTTAGACATTACCTTGTTGTTTTATGCCCATACACAAGGCTGATTTTCAAGATATTTCAGTTCTAAGTTTGAAGCCTGAGTAAAACTTGCATAAATTGAGCC
CTACAAACTCCTTTGATTGGTTTCCTACCATTCGTCTCCAAATATTTATACTGTTACAGGACTTCATGATGAGACGATTATGAACCGATACACGAAAGTGATGACTAATT
CATGGCTGTGTTGGTCTTTCTTGAAGTTACCAGGTTTACCATTTTTCTTTAATGATAATTGGATCCAAGTTCCGTTTGAT
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK