| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7025354.1 putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma] | 3.5e-154 | 100 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| XP_022960509.1 RNA-binding protein 24 isoform X1 [Cucurbita moschata] | 2.5e-152 | 98.91 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSN SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSS G
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| XP_022960510.1 RNA-binding protein 24 isoform X2 [Cucurbita moschata] | 1.4e-150 | 98.55 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSN SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSS G
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAG AATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| XP_023004764.1 RNA-binding protein 38 [Cucurbita maxima] | 1.4e-147 | 96.74 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQ RPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGR RGPSGIV PPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSAN IPGPAGMFQNLYPYYAQSSQG
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQH STGILSLPVSTATGTTSAG A T+TTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| XP_023513417.1 RNA-binding protein 38 [Cucurbita pepo subsp. pepo] | 1.4e-150 | 98.2 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNL PYYAQSSQG
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAA--TTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTA GTTSAGAA TTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAA--TTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K998 RRM domain-containing protein | 2.3e-127 | 83.04 | Show/hide |
Query: MSQPRPFH----SNN----SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
MSQ R FH SNN S+GGQYNDTTFTKIFVGGLAWETQRHTMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
Subjt: MSQPRPFH----SNN----SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
Query: ANCNLASLGAHK-----PQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMF
ANCNLASLGAHK PQHG GGRFRG SGIVTPPAYHVSSSSY+HQPTSQY FPLS YG++GYSQDRIYP+NYYGVYGGQQFSPYYSAN + GPAGMF
Subjt: ANCNLASLGAHK-----PQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMF
Query: QNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
QNLYPYYAQSSQGY FG+QYPHLMQYPYLPQQH STGILSLP S A GTT++G ATT T + GSGP Q S AVA+EPNSSE+ISTG
Subjt: QNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| A0A1S3CBZ0 RNA-binding protein 24-B | 4.2e-129 | 83.74 | Show/hide |
Query: MSQPRPFH----SNN----SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
MSQ R FH SNN S+GGQYNDTTFTKIFVGGLAWETQRHTMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
Subjt: MSQPRPFH----SNN----SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRR
Query: ANCNLASLGAHK-----PQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMF
ANCNLASLGAHK PQHG GGRFRG SGIVTPPAYHVSSSSY+HQPTSQY FPLS YG++GYSQDRIYP+NYYGVYGGQQFSPYYSAN + GPAGMF
Subjt: ANCNLASLGAHK-----PQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMF
Query: QNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
QNLYPYYAQSSQGY FG+QYPHLMQYPYLPQQHGSTGILSLP S A GTT++G AT+TT + GSGP Q SSAVA+EPNSSE+ISTG
Subjt: QNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| A0A6J1H998 RNA-binding protein 24 isoform X2 | 6.7e-151 | 98.55 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSN SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSS G
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAG AATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| A0A6J1HB82 RNA-binding protein 24 isoform X1 | 1.2e-152 | 98.91 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQPRPFHSN SVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSS G
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| A0A6J1KX91 RNA-binding protein 38 | 6.9e-148 | 96.74 | Show/hide |
Query: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
MSQ RPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Subjt: MSQPRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASL
Query: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
GAHKPQHGGGGR RGPSGIV PPAYHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSAN IPGPAGMFQNLYPYYAQSSQG
Subjt: GAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQG
Query: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
YEFGVQYPHLMQYPYLPQQH STGILSLPVSTATGTTSAG A T+TTTMAVGGSGPLQTSSAVATEPNSSEVISTG
Subjt: YEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVISTG
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q5ZJX4 RNA-binding protein 38 | 1.2e-24 | 38.53 | Show/hide |
Query: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSG
DTTFTKIFVGGL + T ++R++FE FG+I EAVVITD+ TG+S+GYGFVT D AA RAC++P+P+IDGR+AN NLA LGA P
Subjt: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSG
Query: IVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQGYEFGVQYPHLM--QYPYL
I T V +H Q PF L+ + Y Q I P + IP P + Y Y +SQ Y QY QYPY
Subjt: IVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQGYEFGVQYPHLM--QYPYL
Query: PQQ------HGSTGILSLPVSTATGTTSAGA
+G TG + P++ +T A A
Subjt: PQQ------HGSTGILSLPVSTATGTTSAGA
|
|
| Q62176 RNA-binding protein 38 | 6.9e-28 | 59.22 | Show/hide |
Query: PRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH
PRP + +++ G DTTFTKIFVGGL + T ++R++FE FG+I EAVVITD+ TG+S+GYGFVT D AA RAC++P+P+IDGR+AN NLA LGA
Subjt: PRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH
Query: KPQ
KP+
Subjt: KPQ
|
|
| Q76LC6 RNA-binding protein 24 | 3.8e-26 | 40.57 | Show/hide |
Query: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSG
DTT+TKIFVGGL + T ++R++FE FGEI EAVVITD+ TG+S+GYGFVT D AA RAC++P+P+IDGR+AN NLA LGA KP R P
Subjt: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSG
Query: IVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYP-------MNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQ-SSQGYEFGVQYPHL
P H + + + Y +P A+ I P + Y Y G ++ Y SA A Q YPY A ++ GY Y +
Subjt: IVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYP-------MNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQ-SSQGYEFGVQYPHL
Query: MQYPYLPQQHGS
MQ P GS
Subjt: MQYPYLPQQHGS
|
|
| Q9H0Z9 RNA-binding protein 38 | 5.3e-28 | 59.22 | Show/hide |
Query: PRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH
PRP + ++ G DTTFTKIFVGGL + T ++R++FE FG+I EAVVITD+ TG+S+GYGFVT D AA RAC++P+P+IDGR+AN NLA LGA
Subjt: PRPFHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH
Query: KPQ
KP+
Subjt: KPQ
|
|
| Q9M1S3 Probable RNA-binding protein ARP1 | 9.0e-28 | 39.65 | Show/hide |
Query: SNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH-----
++N+V G + DT TK+FVGGLAW+T + M F ++G+ILEAV+I+DK T RSKGYGFVTFKD AA RAC++ +P+I+GRRANCNLASLG
Subjt: SNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH-----
Query: ---KPQHG--GGGRFRGPS-GIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGY-SGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQ
PQ G G R P G + Y ++ HQ + P YGY S Y + G GG + YY A P P Q Y ++
Subjt: ---KPQHG--GGGRFRGPS-GIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGY-SGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQ
Query: SSQGYEF----GVQYPHLMQYPYLPQQ
G P YPY Q
Subjt: SSQGYEF----GVQYPHLMQYPYLPQQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 9.2e-44 | 48.15 | Show/hide |
Query: FHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-
FH NS + DTTFTK+FVGGLAWETQ T+RR F+Q+G+ILEAVVITDKNTGRSKGYGFVTF+DP+AA RAC +P+P+IDGRRANCNLASLG +P
Subjt: FHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-
Query: -QHG----GGGRFRGPS----GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMN--YYGVYGGQQFSPYYSANAIPGPAGMFQNLYPY
Q+ GR R PS + +P H S Y PT Y + YG + Y D +Y + +YG Y GQQ+ Y G +
Subjt: -QHG----GGGRFRGPS----GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMN--YYGVYGGQQFSPYYSANAIPGPAGMFQNLYPY
Query: YAQSSQGYEFGVQYPH
+ GY G Y H
Subjt: YAQSSQGYEFGVQYPH
|
|
| AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 9.2e-44 | 48.15 | Show/hide |
Query: FHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-
FH NS + DTTFTK+FVGGLAWETQ T+RR F+Q+G+ILEAVVITDKNTGRSKGYGFVTF+DP+AA RAC +P+P+IDGRRANCNLASLG +P
Subjt: FHSNNSVGGQYNDTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-
Query: -QHG----GGGRFRGPS----GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMN--YYGVYGGQQFSPYYSANAIPGPAGMFQNLYPY
Q+ GR R PS + +P H S Y PT Y + YG + Y D +Y + +YG Y GQQ+ Y G +
Subjt: -QHG----GGGRFRGPS----GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMN--YYGVYGGQQFSPYYSANAIPGPAGMFQNLYPY
Query: YAQSSQGYEFGVQYPH
+ GY G Y H
Subjt: YAQSSQGYEFGVQYPH
|
|
| AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.2e-40 | 45.65 | Show/hide |
Query: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGGGGRF
DTT+TK+FVGGLAWET + TM++ FEQFGEILEAVVITDK +GRSKGYGFVTF++ +AA AC + +PVIDGRRANCNLASLG + P HGGGGR
Subjt: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGGGGRF
Query: RGPSGIVTPPAYHVSSSSYVHQPT-SQYP-FPLSAYGYSGYSQD-RIYPMNYYGVYG---GQQFSPYYSANA----IPGPAGMFQNLYP--------YYA
+++ PT + YP PL+ +GYS YS D +P N YG+YG G Q+ Y + N+ + A YP ++
Subjt: RGPSGIVTPPAYHVSSSSYVHQPT-SQYP-FPLSAYGYSGYSQD-RIYPMNYYGVYG---GQQFSPYYSANA----IPGPAGMFQNLYP--------YYA
Query: QSSQGYEFGVQY-PHLMQYPYLPQQHGSTG
Q Y Y PH P Q G TG
Subjt: QSSQGYEFGVQY-PHLMQYPYLPQQHGSTG
|
|
| AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.6e-40 | 45.49 | Show/hide |
Query: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGGGGRF
DTT+TK+FVGGLAWET + TM++ FEQFGEILEAVVITDK +GRSKGYGFVTF++ +AA AC + +PVIDGRRANCNLASLG + P HGGGGR
Subjt: DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGGGGRF
Query: RGPSGIVTPPAYHVSSSSYVHQPT-SQYP-FPLSAYGYSGYSQD-RIYPMNYYGVYG---GQQFSPYYSANA----IPGPAGMFQNLYP--------YYA
+++ PT + YP PL+ +GYS YS D +P N YG+YG G Q+ Y + N+ + A YP ++
Subjt: RGPSGIVTPPAYHVSSSSYVHQPT-SQYP-FPLSAYGYSGYSQD-RIYPMNYYGVYG---GQQFSPYYSANA----IPGPAGMFQNLYP--------YYA
Query: QSSQGYEFGVQY-PHLMQYPYLPQQHGSTGILS
Q Y Y PH P Q GS LS
Subjt: QSSQGYEFGVQY-PHLMQYPYLPQQHGSTGILS
|
|
| AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.2e-65 | 50.45 | Show/hide |
Query: MSQPRPFHSNNSVGGQYN--DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLA
M+Q R F GG N DT TKIFVGGLAWETQR TMRR+FEQFGEI+EAVVITDKNTGRSKGYGFVTFK+ +AA+RACQN +PVIDGRRANCNLA
Subjt: MSQPRPFHSNNSVGGQYN--DTTFTKIFVGGLAWETQRHTMRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLA
Query: SLGAHKPQ-----HGGGGRFRGPS---GIVTP-PAYHVSSSS--YVHQP----TSQYPFPLSAYGYSGYSQDRIYPMNYYG--VYGGQQFSPYYSANAIP
LGA KP+ G GRFR P G+V P P + SSSS +VHQ T+Q+PFP S YG+SGYSQ+ +YPMNYY +YGGQQFSP Y +
Subjt: SLGAHKPQ-----HGGGGRFRGPS---GIVTP-PAYHVSSSS--YVHQP----TSQYPFPLSAYGYSGYSQDRIYPMNYYG--VYGGQQFSPYYSANAIP
Query: GPAGMFQNLYPYY-----------------AQSSQGYEFGVQY-----PHLMQYPYLPQQ-HGST-----------GILSLPVSTA---------TGTTS
G GMF YPYY AQ QG+ F QY P L+QYPYLP Q H S+ ILSLP S A + +TS
Subjt: GPAGMFQNLYPYY-----------------AQSSQGYEFGVQY-----PHLMQYPYLPQQ-HGST-----------GILSLPVSTA---------TGTTS
Query: AGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVIST
AA T T T+ + + + A + + N + ST
Subjt: AGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEVIST
|
|
