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Carg04987 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04987
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:858088..859760
RNA-Seq ExpressionCarg04987
SyntenyCarg04987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025358.1 hypothetical protein SDJN02_11853, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-60100Show/hide
Query:  MASILLTSCKGDFLAFRSPQTLSLKQMVKVKYNTSAHCSSISCLSFKTYSLLTSMLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLL
        MASILLTSCKGDFLAFRSPQTLSLKQMVKVKYNTSAHCSSISCLSFKTYSLLTSMLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLL
Subjt:  MASILLTSCKGDFLAFRSPQTLSLKQMVKVKYNTSAHCSSISCLSFKTYSLLTSMLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLL

Query:  APLRTAINELIFEVDIARLKQL
        APLRTAINELIFEVDIARLKQL
Subjt:  APLRTAINELIFEVDIARLKQL
TrEMBL top hitse value%identityAlignment
A0A0A9QHZ7 Uncharacterized protein1.1e-1570.59Show/hide
Query:  MLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLLAPLRTAINELIFEVDIARLKQL
        MLFKAVAIS PVF TPTPP+ SFAPKFGSRI  C+ASWYSLL RL+ P  TA  E I  VD AR +QL
Subjt:  MLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLLAPLRTAINELIFEVDIARLKQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAATACTTTTGACAAGTTGCAAAGGAGATTTCCTCGCCTTCAGGTCTCCCCAAACATTATCTTTGAAGCAAATGGTAAAGGTGAAGTATAATACCTCCGCACA
CTGCTCCTCGATCTCATGTTTGAGTTTCAAAACGTATTCACTACTCACGTCCATGTTATTCAAAGCTGTTGCGATCTCCGTCCCCGTCTTCTGTACGCCAACACCACCTA
AGAATAGTTTCGCACCTAAATTTGGTTCTCGCATTTTCTGCTGTAATGCCTCTTGGTATTCGTTGCTCAATAGACTACTAGCACCACTCAGAACTGCAATCAATGAACTG
ATATTCGAAGTAGATATTGCACGTCTTAAGCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAATACTTTTGACAAGTTGCAAAGGAGATTTCCTCGCCTTCAGGTCTCCCCAAACATTATCTTTGAAGCAAATGGTAAAGGTGAAGTATAATACCTCCGCACA
CTGCTCCTCGATCTCATGTTTGAGTTTCAAAACGTATTCACTACTCACGTCCATGTTATTCAAAGCTGTTGCGATCTCCGTCCCCGTCTTCTGTACGCCAACACCACCTA
AGAATAGTTTCGCACCTAAATTTGGTTCTCGCATTTTCTGCTGTAATGCCTCTTGGTATTCGTTGCTCAATAGACTACTAGCACCACTCAGAACTGCAATCAATGAACTG
ATATTCGAAGTAGATATTGCACGTCTTAAGCAACTCTGA
Protein sequenceShow/hide protein sequence
MASILLTSCKGDFLAFRSPQTLSLKQMVKVKYNTSAHCSSISCLSFKTYSLLTSMLFKAVAISVPVFCTPTPPKNSFAPKFGSRIFCCNASWYSLLNRLLAPLRTAINEL
IFEVDIARLKQL