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Carg05001 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05001
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMads box protein, putative
Genome locationCarg_Chr08:948617..949739
RNA-Seq ExpressionCarg05001
SyntenyCarg05001
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025371.1 Agamous-like MADS-box protein AGL9-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

XP_022959858.1 agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita moschata]2.9e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

XP_022959859.1 agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata]2.9e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

XP_023004223.1 agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita maxima]2.9e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

XP_023514992.1 agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita pepo subsp. pepo]2.9e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

TrEMBL top hitse value%identityAlignment
A0A6J1DQB6 agamous-like MADS-box protein AGL9 homolog4.0e-4797.89Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRL+EGYQVNALQLNQSADDMMYGRQQAQPP+DAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

A0A6J1H751 agamous-like MADS-box protein AGL9 homolog isoform X11.4e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

A0A6J1H9B2 agamous-like MADS-box protein AGL9 homolog isoform X21.4e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

A0A6J1KVP3 agamous-like MADS-box protein AGL9 homolog isoform X21.4e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

A0A6J1KYU4 agamous-like MADS-box protein AGL9 homolog isoform X11.4e-47100Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

SwissProt top hitse value%identityAlignment
O04067 Agamous-like MADS-box protein AGL9 homolog1.4e-2056Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADD--MMYGR---QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQ KE +LNE NKTL+ RL +GYQ+  LQLN + +D  + YGR   QQ Q    AFF PL+CEP LQ+GYQ      + AGPS NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADD--MMYGR---QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

O22456 Developmental protein SEPALLATA 32.0e-1956.12Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQ KE +L E NKTL+ RL +GYQ+  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

O65874 MADS-box transcription factor 15.8e-2766.67Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGR-QQAQPPSDAFF--HPLDCEPTLQIGY-QPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQRKEHLL EAN+ L+QR+ EGYQ+N+LQLN SA+DM YGR  Q     D  F   P++CEPTLQIGY Q DP +VVTAGPSMNN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGR-QQAQPPSDAFF--HPLDCEPTLQIGY-QPDPITVVTAGPSMNNFLPGWLP

Q03489 Agamous-like MADS-box protein AGL9 homolog2.3e-3170.53Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQRKEH LNEAN+TLKQRL+EG  +N LQ  Q+A D+ YGRQ  Q   D FFHPL+CEPTLQIGYQ DPITV  AGPS+NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

Q8LLR0 Agamous-like MADS-box protein MADS47.8e-4080Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQLTDLQRKEH+LNEANKTLKQRL+EG QVN LQ N +A D+ YGRQQAQP  D FFHPL+CEPTLQIGYQPDPITV  AGPS+NN++PGWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein1.4e-2056.12Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQ KE +L E NKTL+ RL +GYQ+  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

AT1G24260.2 K-box region and MADS-box transcription factor family protein1.4e-2056.12Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQ KE +L E NKTL+ RL +GYQ+  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

AT1G24260.3 K-box region and MADS-box transcription factor family protein2.2e-1347.96Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP
        MLDQL DLQ K              L +GYQ+  LQLN + +++  YGR   Q Q  S AFF PL+CEP LQIGYQ      + AGPS+NN++ GWLP
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDM-MYGR--QQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP

AT3G02310.1 K-box region and MADS-box transcription factor family protein2.3e-1035.24Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRL-----IEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGPSM--NNF
        MLDQL+DLQ KEH+L +AN+ L  +L     +  + +          ++ YG  QA   S   +  L+C+PTLQIGY      + + V   G S   N +
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRL-----IEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGPSM--NNF

Query:  LPGWL
        +PGW+
Subjt:  LPGWL

AT5G15800.1 K-box region and MADS-box transcription factor family protein8.7e-1034.91Show/hide
Query:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSA------DDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGPSM--NN
        MLDQL+DLQ KE +L E N+ L  +L +   V +  +           ++ Y   QAQ  S   + PL+C PTLQ+GY      + IT  T   +   N 
Subjt:  MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSA------DDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQ----PDPITVVTAGPSM--NN

Query:  FLPGWL
        ++PGW+
Subjt:  FLPGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCGCTCCAATT
GAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAAC
CAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAACAATTTCCTCCCAGGATGGTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGATCAGCTCACTGATCTTCAACGTAAGGAACATCTTCTTAACGAAGCAAACAAGACACTGAAACAAAGGTTGATTGAAGGGTATCAAGTAAATGCGCTCCAATT
GAACCAAAGTGCTGATGATATGATGTATGGAAGACAACAAGCTCAGCCTCCTAGCGATGCCTTCTTTCATCCTCTAGATTGTGAACCCACCTTACAAATTGGGTATCAAC
CAGATCCCATAACAGTGGTGACTGCTGGGCCGAGCATGAACAATTTCCTCCCAGGATGGTTGCCTTGAGAAACAACAAGGAGATGGAAATTTTTCCATTCAAAAATTGGA
GAAAGAAAAGGGCAGTCATTTTCTTTGCTTCTGTTGCTTACCTCTAAACCCCTCCTCCC
Protein sequenceShow/hide protein sequence
MLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVNALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGWLP