; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05008 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05008
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr08:997571..998815
RNA-Seq ExpressionCarg05008
SyntenyCarg05008
Gene Ontology termsGO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021013 - ATPase, vacuolar ER assembly factor, Vma12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592966.1 hypothetical protein SDJN03_12442, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8797.31Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNS---DDDDDDEFSREDIVKELKKV
        MEKEQRL+LIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNS   DDDDDDEFSREDIVKELKKV
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNS---DDDDDDEFSREDIVKELKKV

Query:  KRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
        KRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHM LQ
Subjt:  KRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ

KAG7025378.1 hypothetical protein SDJN02_11873 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-90100Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKKVKRQ
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKKVKRQ
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKKVKRQ

Query:  NVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
        NVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
Subjt:  NVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ

XP_022959912.1 uncharacterized protein LOC111460826 [Cucurbita moschata]1.9e-8796.79Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDE GDRTLLHDLLSQIESL    KEGTESEELASALDNLKSKAKNSDDDDDD+FSREDIVKELKK
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK

Query:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
        VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
Subjt:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ

XP_023004225.1 uncharacterized protein LOC111497620 [Cucurbita maxima]9.0e-8286.14Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL------------KEGTESEELASALDNLKSKAKNS-------DDDD
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL            KEGTESEELASALDNLK+K+KNS       DDDD
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL------------KEGTESEELASALDNLKSKAKNS-------DDDD

Query:  DDEFSREDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMG
        ++EFS+EDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTI+ENSPKQEHDEASMLP LQIPELPH+G
Subjt:  DDEFSREDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMG

Query:  LQ
        L+
Subjt:  LQ

XP_023513706.1 uncharacterized protein LOC111778234 [Cucurbita pepo subsp. pepo]4.0e-8294.12Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL    KEGTESE+LASALDNLKSKAKNS   DDDEFSREDIVKELKK
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK

Query:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
        VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENS KQEHDEASMLP LQIPEL HMGLQ
Subjt:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K9P4 Uncharacterized protein8.3e-5769.68Show/hide
Query:  EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDD--DDEFSREDIVKELKKVKR
        E+EQRLELI  AI RLL +NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGTESEEL SALD LK+K ++S  ++  DDE SRED+VKELKK+KR
Subjt:  EKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDD--DDEFSREDIVKELKKVKR

Query:  QNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPTLQIPELPHMGLQ
        QN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP L+I +LP +GLQ
Subjt:  QNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN----SPKQEHDEASMLPTLQIPELPHMGLQ

A0A1S3CAM6 uncharacterized protein LOC1034988431.5e-5869.84Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKN--SDDDDDDEFSREDIVKELKKVK
        ME+EQRLELI  AI+RLL++NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGTES+E  SALD LK+K ++   ++  DDE SREDIVKELKK+K
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKN--SDDDDDDEFSREDIVKELKKVK

Query:  RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLPTLQIPELPHMGLQ
        RQN+LT CL+SVMIV+T+VWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTIV+    NS +Q++DE S+LP L+IPELPHMGLQ
Subjt:  RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLPTLQIPELPHMGLQ

A0A5A7T973 Uncharacterized protein1.5e-5869.84Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKN--SDDDDDDEFSREDIVKELKKVK
        ME+EQRLELI  AI+RLL++NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGTES+E  SALD LK+K ++   ++  DDE SREDIVKELKK+K
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKN--SDDDDDDEFSREDIVKELKKVK

Query:  RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLPTLQIPELPHMGLQ
        RQN+LT CL+SVMIV+T+VWQLSEVSI+LNVKD+ISHPFR LG+ ISG  KRPKTIV+    NS +Q++DE S+LP L+IPELPHMGLQ
Subjt:  RQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVE----NSPKQEHDEASMLPTLQIPELPHMGLQ

A0A6J1H7B2 uncharacterized protein LOC1114608269.1e-8896.79Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDE GDRTLLHDLLSQIESL    KEGTESEELASALDNLKSKAKNSDDDDDD+FSREDIVKELKK
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL----KEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKK

Query:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
        VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ
Subjt:  VKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ

A0A6J1KTZ8 uncharacterized protein LOC1114976204.4e-8286.14Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL------------KEGTESEELASALDNLKSKAKNS-------DDDD
        MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL            KEGTESEELASALDNLK+K+KNS       DDDD
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESL------------KEGTESEELASALDNLKSKAKNS-------DDDD

Query:  DDEFSREDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMG
        ++EFS+EDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTI+ENSPKQEHDEASMLP LQIPELPH+G
Subjt:  DDEFSREDIVKELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMG

Query:  LQ
        L+
Subjt:  LQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein6.1e-2036.08Show/hide
Query:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIES--------LKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVK
        ME  + +E +  AIE+LL E + +++S  ++I D D   D+  L  L+SQ+ES        +  G E E+   + D+  SK K S+     E S E+I K
Subjt:  MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIES--------LKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVK

Query:  ELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN--------SPKQEHDEASML-PTLQIPEL
        ++KKVK+QN +T  L+S  I++T+VWQLSE S++  +KD+ISHP R +G +++G  K     ++N        + +  H   S   P LQ+PEL
Subjt:  ELKKVKRQNVLTQCLVSVMIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVEN--------SPKQEHDEASML-PTLQIPEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGATCGAAGCTACATCCACGATTGCGATGA
AAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACGGAATCAGAGGAGTTGGCTTCTGCATTAGATAATTTGAAATCGAAAG
CTAAGAACTCTGATGATGATGATGATGATGAGTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAACGTTTTAACTCAGTGTCTTGTCTCAGTG
ATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAGATTCCTGGGCAGTTTGATCTCAGGAGC
GCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCCCAGAACTTCCTCATATGGGTTTGCAGT
AA
mRNA sequenceShow/hide mRNA sequence
CATAGAAATTTCTAGTGGAACAGTCCGATGGAAAAAGAGCAACGCCTCGAGCTGATCAAACTCGCCATTGAGAGGCTGCTTGATGAGAACAAGAACAAGCAATCCTCTGA
TCGAAGCTACATCCACGATTGCGATGAAAACGGGGACCGTACTCTTCTCCACGATTTGCTCTCTCAGATAGAATCGCTGAAAGAAGGAACGGAATCAGAGGAGTTGGCTT
CTGCATTAGATAATTTGAAATCGAAAGCTAAGAACTCTGATGATGATGATGATGATGAGTTTAGTAGAGAAGACATTGTTAAGGAACTGAAGAAGGTGAAAAGGCAAAAC
GTTTTAACTCAGTGTCTTGTCTCAGTGATGATAGTGGTGACTGTTGTTTGGCAGCTTTCTGAGGTCTCCATTATGTTGAATGTAAAAGATCAAATCAGCCATCCCTTTAG
ATTCCTGGGCAGTTTGATCTCAGGAGCGCTCAAACGCCCAAAAACCATTGTTGAGAATTCACCAAAACAAGAACATGATGAAGCTTCTATGCTTCCCACTCTCCAAATCC
CAGAACTTCCTCATATGGGTTTGCAGTAATTTTGGATTTGATGATGGAAAACATTGGTTGTTCTTGAGCTACAAAGGGAGATGGGGGTTAGACAACAATTTTTCAAACGG
TGCTGATGAAGAAACATGGAGAGATTTGCTTGGAGGAATCCCCAGATTACGTAATTGTTATATTTGTTTGGTTTTGTGAAAATTTGCTTTGTAATTTAGGGGTCGGATTA
TCTTTTGAGGAAAAAAAAAAAATCAAAATTAAAGTGAAAGAACCGTTTTTTCTCCTCCTAATTTAGTTTTCATAATTGGTAGCTTTTACATTAGAAACTATT
Protein sequenceShow/hide protein sequence
MEKEQRLELIKLAIERLLDENKNKQSSDRSYIHDCDENGDRTLLHDLLSQIESLKEGTESEELASALDNLKSKAKNSDDDDDDEFSREDIVKELKKVKRQNVLTQCLVSV
MIVVTVVWQLSEVSIMLNVKDQISHPFRFLGSLISGALKRPKTIVENSPKQEHDEASMLPTLQIPELPHMGLQ