; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05014 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05014
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionselenoprotein F-like
Genome locationCarg_Chr08:1031739..1034657
RNA-Seq ExpressionCarg05014
SyntenyCarg05014
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]3.1e-92100Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

KAG7025384.1 Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma]3.1e-92100Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_022960129.1 selenoprotein F-like [Cucurbita moschata]2.9e-9097.66Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLF DVK+PATVV MAAWAAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]4.9e-9097.08Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLF DVK+PATVV MAAW AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_023513576.1 selenoprotein F-like [Cucurbita pepo subsp. pepo]6.9e-9299.42Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQ+FTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein1.4e-7987.72Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   V  PAT V +   AAAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEE+KD+FPSVK+QY FNSPPKL LLDDEGQHKESIRIDNWKREH LQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

A0A6J1GQK6 selenoprotein F-like9.4e-7987.65Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL T VK PAT+V M   A AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCTEDSDDATSKITYSGA+LEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        KLVFYPEIVGFIEEEKD+FPSV +QY FNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK  S+
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA

A0A6J1HA08 selenoprotein F-like1.4e-9097.66Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLF DVK+PATVV MAAWAAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

A0A6J1JXH9 selenoprotein F-like1.0e-7787.06Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL T VK PAT+V M   A AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCTEDSDDATSKITYSGA+LEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        KLVFYPEIVGFIEEEK +FPSV +QY FNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK  S+
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA

A0A6J1KPJ2 selenoprotein F-like2.4e-9097.08Show/hide
Query:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLF DVK+PATVV MAAW AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F1.1e-1837.4Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++I+Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

A8YXY3 Selenoprotein F2.8e-1937.4Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++I+Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

O60613 Selenoprotein F4.7e-1937.4Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++I+Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Q802F3 Selenoprotein F8.0e-1937.4Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  +K K F  ++I+Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Q923V8 Selenoprotein F1.2e-1736.64Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++I+Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKIQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein1.5e-6571.61Show/hide
Query:  MAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEE
        M   +A +I I +  ++ +KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV+DCLKCC +DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGFIEEE
Subjt:  MAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEE

Query:  KDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        K+KFPSVK+QYIFNSPPKL +LD++G+HKESIRIDNWKREH+LQ++++KVK ++A
Subjt:  KDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTATTCACCGATGTAAAGAGGCCCGCTACGGTGGTGGGAATGGCGGCATGGGCGGCGGCGATAATATTCATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGGCAGACTGTT
TGAAGTGTTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGC
TTCATTGAAGAAGAAAAGGATAAATTCCCTTCTGTTAAGATTCAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCAT
CAGGATTGATAACTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGACAAGGTTAAGCTATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
AAAATAATAATGATACTTTCAGTGAATTTTCAGATCGTCTGGAGACTTAGCTTCTTCCCCACGGTCGACGGTCGACGGTCGACACAGAGATGCAGCTATTCACCGATGTA
AAGAGGCCCGCTACGGTGGTGGGAATGGCGGCATGGGCGGCGGCGATAATATTCATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGA
GGATCTAGGTTTCACTGGCCTCGCTCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGGCAGACTGTTTGAAGTGTTGCACGGAGGATT
CTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGAT
AAATTCCCTTCTGTTAAGATTCAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATTGATAACTGGAAACG
TGAACATATTTTGCAGTTCCTGCAAGACAAGGTTAAGCTATCTTCAGCAATTTAAGGTTCTCATCTTCCTTGTTTCTTTAATATCCCTGTAAAAAACTCTTAAGTCTATT
GTTATATTGTAGTTTTCTTTGATACTGCAATAAATTAGTATCTTATGTTTTCTGTGTTTGGGTAAATTTTATGTTTAATTACCCAAACTCTTTCTAGCACTCTGACTTCA
AAATGAAGAAGGAAAGGTAAAAGGAAAAATGAGAATAATGTTTGAGAATTCGAATGAACTGATATCCAAATAGATGTGTTAAATTGTACAAACACAACACACTCTAGAAG
TATACAAAGATAAACAGCAACTCCTCTAGCGAGTTAAAGGCTTTGAGTACTTCTTCAGAAAAATGTCGAGCAATTTGAGAGAGAGAGGTCTATTCT
Protein sequenceShow/hide protein sequence
MQLFTDVKRPATVVGMAAWAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEEEKDKFPSVKIQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI