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Carg05032 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05032
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:1160830..1167749
RNA-Seq ExpressionCarg05032
SyntenyCarg05032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025401.1 hypothetical protein SDJN02_11896, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-239100Show/hide
Query:  MESSRFHSNRPVFNSYIKTKQFSEVLSCKHVQNLCNRNIESHSHLVVHEANLLQFLPCQKSIITYTTAKLHLYDKIVNSLDGGSPWVTLWQTSLQHSITE
        MESSRFHSNRPVFNSYIKTKQFSEVLSCKHVQNLCNRNIESHSHLVVHEANLLQFLPCQKSIITYTTAKLHLYDKIVNSLDGGSPWVTLWQTSLQHSITE
Subjt:  MESSRFHSNRPVFNSYIKTKQFSEVLSCKHVQNLCNRNIESHSHLVVHEANLLQFLPCQKSIITYTTAKLHLYDKIVNSLDGGSPWVTLWQTSLQHSITE

Query:  SSFITKPSSSPLKAKPGNEVRLKFKFKALPLNAEKAHLNMARRDFQKQSFHHCIQQDKGSLPISYPERKENLASIWHILFLLHWIGRNQVIHIRILGPAH
        SSFITKPSSSPLKAKPGNEVRLKFKFKALPLNAEKAHLNMARRDFQKQSFHHCIQQDKGSLPISYPERKENLASIWHILFLLHWIGRNQVIHIRILGPAH
Subjt:  SSFITKPSSSPLKAKPGNEVRLKFKFKALPLNAEKAHLNMARRDFQKQSFHHCIQQDKGSLPISYPERKENLASIWHILFLLHWIGRNQVIHIRILGPAH

Query:  HIIQTTDISFQSFTISASPFIQIVCTSTILVVLNFKCPRYIYSLRRLDTATENEIKWEKKLILNEVKVKRMIVNPHITEQERVVRYSNEAEINKTIKELL
        HIIQTTDISFQSFTISASPFIQIVCTSTILVVLNFKCPRYIYSLRRLDTATENEIKWEKKLILNEVKVKRMIVNPHITEQERVVRYSNEAEINKTIKELL
Subjt:  HIIQTTDISFQSFTISASPFIQIVCTSTILVVLNFKCPRYIYSLRRLDTATENEIKWEKKLILNEVKVKRMIVNPHITEQERVVRYSNEAEINKTIKELL

Query:  GENLSSLKGKTHQKPLVLSFFSTLKDPSRKSWNGHKGISMGGFEEGAFPSKWLMLPSDRKESSLPKSHPSIIDRHDMQHAICFEASHKLSQIMPANKHPP
        GENLSSLKGKTHQKPLVLSFFSTLKDPSRKSWNGHKGISMGGFEEGAFPSKWLMLPSDRKESSLPKSHPSIIDRHDMQHAICFEASHKLSQIMPANKHPP
Subjt:  GENLSSLKGKTHQKPLVLSFFSTLKDPSRKSWNGHKGISMGGFEEGAFPSKWLMLPSDRKESSLPKSHPSIIDRHDMQHAICFEASHKLSQIMPANKHPP

Query:  ICVECSKSFRHSY
        ICVECSKSFRHSY
Subjt:  ICVECSKSFRHSY
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTCAAGATTCCACTCTAACCGGCCTGTGTTCAATTCTTATATCAAAACAAAACAATTCTCTGAAGTTCTAAGCTGTAAACATGTCCAAAATTTATGCAACAG
AAACATTGAAAGTCATTCCCATCTAGTTGTGCACGAGGCCAATCTGTTGCAGTTCCTGCCATGCCAAAAGAGCATTATTACATATACAACTGCAAAGCTACATCTCTATG
ATAAAATAGTAAACAGCTTAGATGGTGGCAGTCCGTGGGTTACCCTATGGCAGACATCATTACAACATTCGATCACAGAATCCAGCTTTATAACCAAACCATCTTCATCA
CCTTTAAAAGCAAAACCAGGGAACGAAGTAAGACTCAAGTTCAAATTTAAGGCATTGCCTTTAAATGCTGAAAAAGCACATCTAAATATGGCACGAAGAGATTTCCAGAA
GCAATCTTTTCACCACTGCATTCAGCAAGACAAGGGTTCGTTGCCAATATCCTATCCTGAAAGAAAAGAAAACTTGGCTAGTATTTGGCACATCCTTTTTCTTCTCCACT
GGATAGGAAGGAACCAAGTCATCCACATTAGAATTCTGGGGCCTGCACATCACATCATTCAAACTACTGATATATCTTTCCAATCCTTCACCATAAGTGCTAGTCCCTTT
ATTCAAATTGTTTGCACTAGCACCATCTTGGTTGTCTTGAATTTCAAGTGTCCTCGTTACATCTATTCTCTCAGGAGGTTGGATACAGCAACAGAGAATGAAATCAAGTG
GGAGAAAAAATTAATATTGAATGAAGTAAAAGTTAAACGAATGATTGTTAACCCTCACATTACTGAGCAAGAGCGAGTGGTTAGATACAGCAACGAAGCAGAAATAAACA
AGACAATAAAAGAGCTTCTTGGAGAAAATCTTTCTTCTCTAAAGGGGAAGACTCATCAGAAACCCCTTGTGCTTTCTTTCTTTTCAACACTCAAGGATCCATCAAGGAAA
AGTTGGAATGGCCACAAGGGAATTTCTATGGGAGGGTTTGAGGAGGGAGCATTTCCCTCGAAGTGGCTGATGCTCCCCTCAGACCGCAAAGAAAGCAGTCTGCCAAAGAG
TCACCCTTCAATCATAGACCGACATGACATGCAACATGCCATTTGCTTCGAAGCCTCTCACAAGTTATCCCAAATTATGCCTGCAAACAAGCATCCTCCCATCTGCGTAG
AATGTTCCAAATCCTTTAGGCACTCATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTCAAGATTCCACTCTAACCGGCCTGTGTTCAATTCTTATATCAAAACAAAACAATTCTCTGAAGTTCTAAGCTGTAAACATGTCCAAAATTTATGCAACAG
AAACATTGAAAGTCATTCCCATCTAGTTGTGCACGAGGCCAATCTGTTGCAGTTCCTGCCATGCCAAAAGAGCATTATTACATATACAACTGCAAAGCTACATCTCTATG
ATAAAATAGTAAACAGCTTAGATGGTGGCAGTCCGTGGGTTACCCTATGGCAGACATCATTACAACATTCGATCACAGAATCCAGCTTTATAACCAAACCATCTTCATCA
CCTTTAAAAGCAAAACCAGGGAACGAAGTAAGACTCAAGTTCAAATTTAAGGCATTGCCTTTAAATGCTGAAAAAGCACATCTAAATATGGCACGAAGAGATTTCCAGAA
GCAATCTTTTCACCACTGCATTCAGCAAGACAAGGGTTCGTTGCCAATATCCTATCCTGAAAGAAAAGAAAACTTGGCTAGTATTTGGCACATCCTTTTTCTTCTCCACT
GGATAGGAAGGAACCAAGTCATCCACATTAGAATTCTGGGGCCTGCACATCACATCATTCAAACTACTGATATATCTTTCCAATCCTTCACCATAAGTGCTAGTCCCTTT
ATTCAAATTGTTTGCACTAGCACCATCTTGGTTGTCTTGAATTTCAAGTGTCCTCGTTACATCTATTCTCTCAGGAGGTTGGATACAGCAACAGAGAATGAAATCAAGTG
GGAGAAAAAATTAATATTGAATGAAGTAAAAGTTAAACGAATGATTGTTAACCCTCACATTACTGAGCAAGAGCGAGTGGTTAGATACAGCAACGAAGCAGAAATAAACA
AGACAATAAAAGAGCTTCTTGGAGAAAATCTTTCTTCTCTAAAGGGGAAGACTCATCAGAAACCCCTTGTGCTTTCTTTCTTTTCAACACTCAAGGATCCATCAAGGAAA
AGTTGGAATGGCCACAAGGGAATTTCTATGGGAGGGTTTGAGGAGGGAGCATTTCCCTCGAAGTGGCTGATGCTCCCCTCAGACCGCAAAGAAAGCAGTCTGCCAAAGAG
TCACCCTTCAATCATAGACCGACATGACATGCAACATGCCATTTGCTTCGAAGCCTCTCACAAGTTATCCCAAATTATGCCTGCAAACAAGCATCCTCCCATCTGCGTAG
AATGTTCCAAATCCTTTAGGCACTCATACTGA
Protein sequenceShow/hide protein sequence
MESSRFHSNRPVFNSYIKTKQFSEVLSCKHVQNLCNRNIESHSHLVVHEANLLQFLPCQKSIITYTTAKLHLYDKIVNSLDGGSPWVTLWQTSLQHSITESSFITKPSSS
PLKAKPGNEVRLKFKFKALPLNAEKAHLNMARRDFQKQSFHHCIQQDKGSLPISYPERKENLASIWHILFLLHWIGRNQVIHIRILGPAHHIIQTTDISFQSFTISASPF
IQIVCTSTILVVLNFKCPRYIYSLRRLDTATENEIKWEKKLILNEVKVKRMIVNPHITEQERVVRYSNEAEINKTIKELLGENLSSLKGKTHQKPLVLSFFSTLKDPSRK
SWNGHKGISMGGFEEGAFPSKWLMLPSDRKESSLPKSHPSIIDRHDMQHAICFEASHKLSQIMPANKHPPICVECSKSFRHSY