CuGenDBv2

Gene ID	Carg05057
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Genome location	Carg_Chr08:1303946..1306644
RNA-Seq Expression	Carg05057
Synteny	Carg05057
Gene Ontology terms	GO:0045039 - protein insertion into mitochondrial inner membrane (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function) GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domains	IPR039175 - Mitochondrial import inner membrane translocase subunit TIM22

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593015.1 hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-52

95.69

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Query:  MLSEAAMDSGGPKTLDSDTPL-SSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD
        MLSEAAMDSGGPKTLDSDTPL SSSSSSSSSNYGDWKERIIFPTILAGF+GGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD
Subjt:  MLSEAAMDSGGPKTLDSDTPL-SSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD

Query:  DLMNSAIAGFGTELFL
        DLMNSAIAGFGT   L
Subjt:  DLMNSAIAGFGTELFL

KAG7025425.1 hypothetical protein SDJN02_11920 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-63

100

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Query:  MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDD
        MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDD
Subjt:  MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDD

Query:  LMNSAIAGFGTELFLDAFKVVGSALFDTQ
        LMNSAIAGFGTELFLDAFKVVGSALFDTQ
Subjt:  LMNSAIAGFGTELFLDAFKVVGSALFDTQ

XP_022157212.1 uncharacterized protein LOC111023975 [Momordica charantia]

1.5e-43

86.24

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PKTLDS+TP SSSSSSSSSNYGDWK+RI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYA NLSIV ACYCGAREFVRV R+SEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

XP_022960027.1 uncharacterized protein LOC111460899 [Cucurbita moschata]

8.9e-52

94.92

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Query:  MLSEAAMDSGGPKTLDSDTPLSSSSS---SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
        MLSEAAMDSGGPKTLDSDTPLSSSSS   SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
Subjt:  MLSEAAMDSGGPKTLDSDTPLSSSSS---SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE

Query:  PDDLMNSAIAGFGTELFL
        PDDLMNSAIAGFGT   L
Subjt:  PDDLMNSAIAGFGTELFL

XP_038896923.1 uncharacterized protein LOC120085132 [Benincasa hispida]

2.1e-45

88.99

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS GPK LDSDTP  S SSSSSSNYGDWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6T5 Uncharacterized protein

1.9e-39

81.65

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PKT +SDTP    SSS+SS+YG WKERI +PT+LAG VGGGAGL+SK+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

A0A1S3C726 uncharacterized protein LOC103497594

8.5e-40

80.73

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PKT +SDTP    SSS+SS+YG WKERI +PT+LAG VGGGAGL+SK+RK+HGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

A0A5A7SIX7 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

8.5e-40

80.73

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PKT +SDTP    SSS+SS+YG WKERI +PT+LAG VGGGAGL+SK+RK+HGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

A0A6J1DTZ3 uncharacterized protein LOC111023975

7.4e-44

86.24

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Query:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PKTLDS+TP SSSSSSSSSNYGDWK+RI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYA NLSIV ACYCGAREFVRV R+SEPDDLMNSAI
Subjt:  MDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTELFL
        AGFGT   L
Subjt:  AGFGTELFL

A0A6J1H677 uncharacterized protein LOC111460899

4.3e-52

94.92

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Query:  MLSEAAMDSGGPKTLDSDTPLSSSSS---SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
        MLSEAAMDSGGPKTLDSDTPLSSSSS   SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
Subjt:  MLSEAAMDSGGPKTLDSDTPLSSSSS---SSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE

Query:  PDDLMNSAIAGFGTELFL
        PDDLMNSAIAGFGT   L
Subjt:  PDDLMNSAIAGFGTELFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

1.9e-20

63.89

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Query:  ERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG
        +R++  ++LAG +GGGAGLVSKHR  H   NI   YA N +IVA CYCGARE VR++RRSE DDLMNSAI G
Subjt:  ERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG

Sequences

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CDS sequence

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ATGCTCTCGGAAGCCGCTATGGATTCCGGCGGTCCCAAAACCCTAGATTCAGACACTCCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCAAACTATGGCGATTGGAAAGA
ACGCATCATTTTCCCCACTATTCTCGCAGGATTTGTTGGGGGAGGTGCCGGACTAGTGTCCAAGCATCGGAAAGTTCATGGTCTGGCAAATATTTCTGCGACTTATGCTA
CGAATTTGTCCATTGTCGCTGCTTGCTACTGTGGAGCACGCGAGTTTGTTAGAGTTTCTCGAAGGTCAGAACCTGACGACCTTATGAACTCTGCAATAGCAGGGTTCGGG
ACGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGCTCTGTTCGATACTCAATAA

mRNA sequence

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ATTTGGCGTCGGATGCTCTCGGAAGCCGCTATGGATTCCGGCGGTCCCAAAACCCTAGATTCAGACACTCCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCAAACTATGG
CGATTGGAAAGAACGCATCATTTTCCCCACTATTCTCGCAGGATTTGTTGGGGGAGGTGCCGGACTAGTGTCCAAGCATCGGAAAGTTCATGGTCTGGCAAATATTTCTG
CGACTTATGCTACGAATTTGTCCATTGTCGCTGCTTGCTACTGTGGAGCACGCGAGTTTGTTAGAGTTTCTCGAAGGTCAGAACCTGACGACCTTATGAACTCTGCAATA
GCAGGGTTCGGGACGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGCTCTGTTCGATACTCAATAATGTTCACCGTCGCTGGGACAGCAATAGATTACGCCACA
CTCAAACTAAAACCTGTTTTCAGAAGCTACAAAGAAACAATACTCGAAGAAAGTAGTAGCTGGATGAAATTACCCGAATGGTCCCCGATCCAAGTACTGGACAAGGAAGC
TTTAGCCGCTAAACAAGCTCGGGAGCAACAGCTCTACGCACAGAGGGTACTCGGGCAAGTAAACGAAAAGGATCCTTGAAACATTTTTATCTCCCCATATATCAAGGAAG
GAAAGGATCCAAAGTTTCTTGGATTCTTCAATATACAAGTAAAGATTATAACCATATGGTGTGGATTATGATATAATAAGAAGAGAATTCTGATAGTTGACAATTTTGTT
CTTTATGTTTAATTTCCTTTTCTCTGTTTAATTTCATAGGTCTGTTTACTTTGTGTTTCATTATCAATAAACTGATATTTCTCTTCCAAATTAAGAAATTAGCAGCAGAA
AGAAGAATAAGAGCAAAAGTTGAAGATGATAGTTCCAGCAA

Protein sequence

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MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSNYGDWKERIIFPTILAGFVGGGAGLVSKHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFG
TELFLDAFKVVGSALFDTQ

Carg05057 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome