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Carg05070 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05070
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
Genome locationCarg_Chr08:1403801..1404716
RNA-Seq ExpressionCarg05070
SyntenyCarg05070
Gene Ontology termsGO:2000123 - positive regulation of stomatal complex development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593029.1 EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1896.49Show/hide
Query:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDE FAKPLPQFRSVQTTIAPE+
Subjt:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

KAG7025438.1 hypothetical protein SDJN02_11933, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-29100Show/hide
Query:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEVSCSYYPDDKSFSIFII
        MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEVSCSYYPDDKSFSIFII
Subjt:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEVSCSYYPDDKSFSIFII

XP_022959844.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata]1.2e-1694.83Show/hide
Query:  MAKAAKPLL-LLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKPLL LLLLLLALILCSLCSTMALKGRFSTEDE FAKPLPQFRSVQTTIAPE+
Subjt:  MAKAAKPLL-LLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

XP_023004190.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita maxima]3.8e-1591.23Show/hide
Query:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKP LLLLLLLALILCSLCSTMALKGRFSTED+ FAK LPQFRSVQTTIAPE+
Subjt:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

XP_023514879.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita pepo subsp. pepo]2.0e-1694.74Show/hide
Query:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKP LLLLLLLALILCSLCSTMALKGRFSTEDE FAKPLPQFRSVQTTIAPE+
Subjt:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

TrEMBL top hitse value%identityAlignment
A0A6J1H996 EPIDERMAL PATTERNING FACTOR-like protein 95.7e-1794.83Show/hide
Query:  MAKAAKPLL-LLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKPLL LLLLLLALILCSLCSTMALKGRFSTEDE FAKPLPQFRSVQTTIAPE+
Subjt:  MAKAAKPLL-LLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

A0A6J1KTW3 EPIDERMAL PATTERNING FACTOR-like protein 91.8e-1591.23Show/hide
Query:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV
        MAKAAKP LLLLLLLALILCSLCSTMALKGRFSTED+ FAK LPQFRSVQTTIAPE+
Subjt:  MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCTGCGAAACCACTTCTTCTTCTCCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGACGA
ACATTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGGTTAGTTGTTCGTACTATCCGGACGATAAATCTTTTTCGATTTTTATCATTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGCTGCGAAACCACTTCTTCTTCTCCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGACGA
ACATTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGGTTAGTTGTTCGTACTATCCGGACGATAAATCTTTTTCGATTTTTATCATTT
AGGAATTCGCGTCTCGTTTCTTGATCTCTGTTTCGCGTTTCTGATCTCTTGAATGTACTTTTAAAGTAATCGTTAAATGCTCGAGACTCGAAGTATAATGTGTTTATTTT
TTATGGAAATTTTAAAAAATTCAGATGAGAAATTCGAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTACTTATAATGAATGTAGAGGATGCAAATACAAGTGCAG
AGCCGAGCAAGTGCCAGTTGAAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAATTTCATTTTAATCTCCCCAAATTTTTGTACCAAT
TTTCTTAGTTTTTTGTTCTTTCCAAGACAATTTGAGAGGTAGATTTGAGTCCTACCTTCCTTGAGTCTATTTTGTTAGTGTTACATAAATTTTCGCGTCAGTTTTGTTGT
AACATTTTTCGTTGGTTTTATTGATAATTGTTTAAATCAATAGTTTGTATGGATAACCAAATTAGATTTTTTTTCCTTAAAATTTTATCAAAGCATATGAGTCAAATACA
TGAATTAATTAATACTATACAATGAAATATCGTATAAATATGAGAAATAAGA
Protein sequenceShow/hide protein sequence
MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDEHFAKPLPQFRSVQTTIAPEVSCSYYPDDKSFSIFII