; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionauxin-induced in root cultures protein 12-like
Genome locationCarg_Chr08:1424484..1424675
RNA-Seq ExpressionCarg05075
SyntenyCarg05075
Gene Ontology termsNA
InterPro domainsIPR005018 - DOMON domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593034.1 Auxin-induced in root cultures protein 12, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1670.59Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+G+QALI TLS     V TF + SYSSVRP+PLSFP+WD+AAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

KAG7025442.1 Auxin-induced in root cultures protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1670.59Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+G+QALI TLS     V TF + SYSSVRP+PLSFP+WD+AAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

KAG7025443.1 Auxin-induced in root cultures protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-25100Show/hide
Query:  MSGAQALITTLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        MSGAQALITTLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
Subjt:  MSGAQALITTLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

XP_022959842.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]6.6e-1669.12Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+G+QALI TLS     V TF + SYSS+RP+PLSFP+WD+AAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

XP_023004353.1 auxin-induced in root cultures protein 12-like [Cucurbita maxima]4.6e-1773.53Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        MSG+QALI TLS     V TF ++SYSSVRP+PLSFP+WDIAAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

TrEMBL top hitse value%identityAlignment
A0A6J1GPF3 auxin-induced in root cultures protein 12-like5.3e-1163.77Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSP-LSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+GAQAL+ ++S     V TF ISSYSSV PSP LSF +W +AAE +D R TIFATV+VP K KSLNQV
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSP-LSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

A0A6J1H5N9 auxin-induced in root cultures protein 12-like3.2e-1669.12Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+G+QALI TLS     V TF + SYSS+RP+PLSFP+WD+AAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

A0A6J1JNF6 auxin-induced in root cultures protein 12-like8.1e-1265.22Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSP-LSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M+GAQAL+ ++S     V TF ISSYSSV PSP LSF +W +AAEF+D R TIFATV+VP K KSLNQV
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSP-LSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

A0A6J1JNY3 auxin-induced in root cultures protein 12-like1.4e-1166.67Show/hide
Query:  MSGAQALIT-----TLSVHTFGISSYSSVRPS-PLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        M GAQALI      T SV TF ISSYS V PS  LSFP+WD+AAE +DE+ TIFATV+VP K KSLNQV
Subjt:  MSGAQALIT-----TLSVHTFGISSYSSVRPS-PLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

A0A6J1KZ88 auxin-induced in root cultures protein 12-like2.2e-1773.53Show/hide
Query:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV
        MSG+QALI TLS     V TF ++SYSSVRP+PLSFP+WDIAAEFAD+R+TIFATVEVPAK KS+N V
Subjt:  MSGAQALITTLS-----VHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV

SwissProt top hitse value%identityAlignment
Q94BT2 Auxin-induced in root cultures protein 125.4e-0542.25Show/hide
Query:  MSGAQALITTLS-------VHTFGISSYSSVRPSPLSFPIWDIAAE-FADERLTIFATVEVPAKPKSLNQV
        M+G+QA +   S       V T+ ISSYSS+    L+F  W++ AE  +  R+ IF TV+VPA   S+NQV
Subjt:  MSGAQALITTLS-------VHTFGISSYSSVRPSPLSFPIWDIAAE-FADERLTIFATVEVPAKPKSLNQV

Q9SV71 Cytochrome b561 and DOMON domain-containing protein At4g129807.1e-0547.69Show/hide
Query:  MSGAQALITT-------LSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA
        M+G+QAL+ +        SV T  I SYSS+ PS LSF +WD+ AE A      L IFA V+VPA
Subjt:  MSGAQALITT-------LSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA

Arabidopsis top hitse value%identityAlignment
AT3G07390.1 auxin-responsive family protein3.9e-0642.25Show/hide
Query:  MSGAQALITTLS-------VHTFGISSYSSVRPSPLSFPIWDIAAE-FADERLTIFATVEVPAKPKSLNQV
        M+G+QA +   S       V T+ ISSYSS+    L+F  W++ AE  +  R+ IF TV+VPA   S+NQV
Subjt:  MSGAQALITTLS-------VHTFGISSYSSVRPSPLSFPIWDIAAE-FADERLTIFATVEVPAKPKSLNQV

AT3G25290.1 Auxin-responsive family protein1.2e-0444.62Show/hide
Query:  MSGAQALIT-------TLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA
        M G+Q L+           V T  ISSYSS+ PS L+F +WD+ AE A      L IFA V+VPA
Subjt:  MSGAQALIT-------TLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA

AT3G25290.2 Auxin-responsive family protein1.2e-0444.62Show/hide
Query:  MSGAQALIT-------TLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA
        M G+Q L+           V T  ISSYSS+ PS L+F +WD+ AE A      L IFA V+VPA
Subjt:  MSGAQALIT-------TLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA

AT4G12980.1 Auxin-responsive family protein5.0e-0647.69Show/hide
Query:  MSGAQALITT-------LSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA
        M+G+QAL+ +        SV T  I SYSS+ PS LSF +WD+ AE A      L IFA V+VPA
Subjt:  MSGAQALITT-------LSVHTFGISSYSSVRPSPLSFPIWDIAAEFADE---RLTIFATVEVPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAGCCCAGGCCCTCATCACCACCCTCTCCGTCCATACCTTCGGCATTTCCTCCTACTCTTCCGTCCGCCCCTCACCGCTCTCCTTCCCCATCTGGGACATCGC
CGCTGAATTCGCTGACGAACGGCTCACAATCTTCGCTACTGTGGAAGTTCCAGCCAAGCCTAAGTCGCTGAACCAGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGAGCCCAGGCCCTCATCACCACCCTCTCCGTCCATACCTTCGGCATTTCCTCCTACTCTTCCGTCCGCCCCTCACCGCTCTCCTTCCCCATCTGGGACATCGC
CGCTGAATTCGCTGACGAACGGCTCACAATCTTCGCTACTGTGGAAGTTCCAGCCAAGCCTAAGTCGCTGAACCAGGTCTAG
Protein sequenceShow/hide protein sequence
MSGAQALITTLSVHTFGISSYSSVRPSPLSFPIWDIAAEFADERLTIFATVEVPAKPKSLNQV