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Carg05105 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05105
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:1626582..1627650
RNA-Seq ExpressionCarg05105
SyntenyCarg05105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593063.1 DNA-directed RNA polymerases II and IV subunit 5A, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3888.78Show/hide
Query:  RVIRSIIQCP--LSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
        +V++ I   P   SSLLFSSLLFPDLNF+SSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
Subjt:  RVIRSIIQCP--LSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
KAG7025473.1 hypothetical protein SDJN02_11968, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-47100Show/hide
Query:  MWQRVIRSIIQCPLSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
        MWQRVIRSIIQCPLSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
Subjt:  MWQRVIRSIIQCPLSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAAAGGGTTATTCGTAGTATTATTCAGTGCCCCCTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCCCGATCTTAATTTCCTCTCTTCCCCTCTCTCTCTCCG
CTGTTCCCGGCCGCCGGAGCTACTTCTTCACTCTCCTCACACCCCATTCTCCACCCCCTTTTCCCCTCAATTTCATCTCATTCTTCGATTCGATTCCCGCAACCTCTGTT
TCTCGATCGCTTTCTCCATCTCTTACCGTTTTCTGGCGCCTCTTTGCTCTTCTTTTCCACCCTTCGCCGCCGAGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCAAAGGGTTATTCGTAGTATTATTCAGTGCCCCCTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCCCGATCTTAATTTCCTCTCTTCCCCTCTCTCTCTCCG
CTGTTCCCGGCCGCCGGAGCTACTTCTTCACTCTCCTCACACCCCATTCTCCACCCCCTTTTCCCCTCAATTTCATCTCATTCTTCGATTCGATTCCCGCAACCTCTGTT
TCTCGATCGCTTTCTCCATCTCTTACCGTTTTCTGGCGCCTCTTTGCTCTTCTTTTCCACCCTTCGCCGCCGAGTTATAA
Protein sequenceShow/hide protein sequence
MWQRVIRSIIQCPLSSLLFSSLLFPDLNFLSSPLSLRCSRPPELLLHSPHTPFSTPFSPQFHLILRFDSRNLCFSIAFSISYRFLAPLCSSFPPFAAEL