| GenBank top hits | e value | %identity | Alignment |
|---|
| ESR64457.1 hypothetical protein CICLE_v10009504mg [Citrus clementina] | 3.7e-62 | 84.93 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
M L++EEI RLFR+R+TV+QML+DRGYFVGDFE++MS+EQF K+GE+MKRED+VINKA RNDSSDQEAELLVNIK+HVLVPEHQ+L+NEEKKTLL+RYT
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
Query: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
VKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Subjt: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
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| KAF3965687.1 hypothetical protein CMV_010147 [Castanea mollissima] | 6.3e-62 | 84.25 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
MV++E+E RLFR+RKTV+QMLKDRGY V DFEVDM+++QF+ KYGESMKRED+VINK KR DSSDQEAEL+VNIK+HVLVPEHQ+L+ EEKKTLLERYT
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
Query: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
VKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Subjt: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
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| KAG7025474.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucurbita argyrosperma subsp. argyrosperma] | 1.5e-71 | 100 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
Query: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Subjt: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
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| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 2.6e-63 | 70.87 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 1.1e-61 | 67.96 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVL+EEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSREQFK+KYGESMKREDIVINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.8e-62 | 67.48 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVL+EEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSREQFK+KYGESMKRED+VINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.2e-63 | 70.87 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.2e-62 | 67.96 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVL+EEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSREQFK+KYGESMKREDIVINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.2e-63 | 70.87 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| V4UEF9 Uncharacterized protein | 1.8e-62 | 84.93 | Show/hide |
Query: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
M L++EEI RLFR+R+TV+QML+DRGYFVGDFE++MS+EQF K+GE+MKRED+VINKA RNDSSDQEAELLVNIK+HVLVPEHQ+L+NEEKKTLL+RYT
Subjt: MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSDQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYT
Query: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
VKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Subjt: VKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
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|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.3e-30 | 42.03 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGE-----SMKREDIVINKAKRNDSSDQ--------------------------------
E E RL+R+RKTVLQM+ DRGY V E+D E FK +G+ R D+ I A +D +DQ
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGE-----SMKREDIVINKAKRNDSSDQ--------------------------------
Query: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
EAEL+VNI +H LVPEH +++ EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY
Subjt: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
+TYR VV
Subjt: VTYRYVV
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| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.6e-29 | 38.35 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGES-----MKREDIVINKAKRNDSSDQ--------------------------------
EEE RL+++RKT++Q+ DRGY V E+D + E+FK ++G+ +R D+ + A +D +DQ
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGES-----MKREDIVINKAKRNDSSDQ--------------------------------
Query: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+ ELL+NI +H LVPEH +++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 2.0e-50 | 54.15 | Show/hide |
Query: VLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD-----------------------------------
+L EEE+ RL+R++KT++QML+DRGYF+ D E+ M+++QF K+G++MKRED+V KAKRND+SD
Subjt: VLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD-----------------------------------
Query: -------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
QEAE+LVNIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: -------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.6e-29 | 38.35 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGES-----MKREDIVINKAKRNDSSDQ--------------------------------
EEE RL+++RKT++Q+ DRGY V E+D + E+FK ++G+ +R D+ + A +D +DQ
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGES-----MKREDIVINKAKRNDSSDQ--------------------------------
Query: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+ ELL+NI +H LVPEH +++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.0e-30 | 42.51 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGE-----SMKREDIVINKAKRNDSSDQ--------------------------------
E E RL+R+RKTVLQM+ DRGY V E+D E FK +YG+ R D+ I A +D +DQ
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGE-----SMKREDIVINKAKRNDSSDQ--------------------------------
Query: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
EAEL+VNI +H LVPEH +++ EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY
Subjt: ----------------------------EAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
+TYR VV
Subjt: VTYRYVV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 4.1e-19 | 29.8 | Show/hide |
Query: EITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------------
E + + R+T ++ML+DRGY V D ++++S +QF+ YGE + + I+ R DSS
Subjt: EITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------------
Query: -------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ +LLVN+ HVL P+HQ+L+++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VTYR V
Subjt: -------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.4e-51 | 54.15 | Show/hide |
Query: VLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD-----------------------------------
+L EEE+ RL+R++KT++QML+DRGYF+ D E+ M+++QF K+G++MKRED+V KAKRND+SD
Subjt: VLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD-----------------------------------
Query: -------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
QEAE+LVNIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: -------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 5.2e-14 | 28.14 | Show/hide |
Query: EITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------------
E R + R T +ML+DRGY V + E+ ++ +F++ +GE + E + I R+D
Subjt: EITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD----------------------------------------
Query: -----QEA--------------ELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
Q+A +LLVNI H+ P+ ++L+ EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR ++
Subjt: -----QEA--------------ELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYVV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.4e-19 | 31.19 | Show/hide |
Query: LAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD------------------------------------
L+ EE R + R+ LQML+DRGY V D ++++S F+ YGE + + I+ R+DS+
Subjt: LAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAKRNDSSD------------------------------------
Query: -----------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYR
Q +LLVNI H L P+HQ+L++EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V +R
Subjt: -----------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYR
Query: YV
V
Subjt: YV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 6.6e-25 | 34.95 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESM---KREDIVINKAKRNDSSD-----------------------------------
++EITR+F+VR+TVLQML+DRGY + + ++++ RE+F ++ ++M +E + ++ K + +D
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESM---KREDIVINKAKRNDSSD-----------------------------------
Query: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
+EAEL+ NI +H LV ++ +L ++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: --------------------------QEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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