; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05132 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05132
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear cap-binding protein subunit 2
Genome locationCarg_Chr07:3087608..3091510
RNA-Seq ExpressionCarg05132
SyntenyCarg05132
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026974.1 Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]7.6e-188100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
        MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]5.1e-11569.46Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG RHGRDYHHRKR+RDDDRHAHESSKRTSD+ES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]7.8e-11669.76Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q+G HGGSHGHG+RHGRDYHHRKR+RDDDRHAHESSKRTSD+ES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022947066.1 nuclear cap-binding protein subunit 2-like [Cucurbita moschata]1.1e-12574.55Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022971080.1 nuclear cap-binding protein subunit 2-like [Cucurbita maxima]4.1e-12574.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKR SDFES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 21.3e-11971.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDPDILFSF                            
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG RHGRDYHHRKR+RDDDRHAHESSKRTSD+ES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 23.8e-11669.76Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q+G HGGSHGHG+RHGRDYHHRKR+RDDDRHAHESSKRTSD+ES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1G5C4 Nuclear cap-binding protein subunit 25.3e-12674.55Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1I4R2 Nuclear cap-binding protein subunit 22.0e-12574.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKR SDFES
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 23.9e-11368.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIR DFDWGFQDGRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGKLVQKELEAQRQLVDYGT SLGSMP V+ Q+G HGGSHG+G+RHGRDYH+RKR+RDDDRHAHESSKRTSD++S
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRN +HESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B7P877 Nuclear cap-binding protein subunit 24.8e-4456.13Show/hide
Query:  LSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E  L  STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYD
         GF +GRQ+GRG+SGG                            QVRDEYRTDYD
Subjt:  WGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYD

Q3ZBJ1 Nuclear cap-binding protein subunit 29.1e-4356.41Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L  S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYD
        D GF++GRQ+GRGRSGG                            QVRDEYR DYD
Subjt:  DWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYD

Q54KR9 Nuclear cap-binding protein subunit 21.3e-4453.61Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        M+ L+  P     Y D++   TQDEF+HA+  S+T+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+N KTPCGFCFV YYS+ED  D +K+I+G+ L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDP
        D+R IR D+D+GF++GRQ+GRG SGG                            QVRDEYRTDYDP
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDP

Q84L14 Nuclear cap-binding protein subunit 23.6e-7954.05Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E AL +S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVK+ISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGF++GRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES
                               GGYGK+VQKELEAQR+LVDYG     + PP     G+    +G  YR+ RDY  RKR+R+D+R    SS+R  D E 
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFES

Query:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR
        +R++      EKNPRFRE GDSDEEDDD  K+R
Subjt:  RRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR

Q9XFD1 Nuclear cap-binding protein subunit 29.0e-9156.93Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR
                               GGYGKLVQKELEAQRQLVDYGT SLG+ P    + +GN    GG++G G   RHGR  +HRKR RDDDR+  ++S+R
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR

Query:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR
         +D ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-0830.39Show/hide
Query:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L +         TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein1.2e-0834.21Show/hide
Query:  SSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRV
        S +T+YV N+ F  T   ++ LFS  G++ ++ +  D++++   G  FVLY SRED   A + +   IL+ R + V
Subjt:  SSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRV

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0835.53Show/hide
Query:  STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD
        S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 206.4e-9256.93Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR
                               GGYGKLVQKELEAQRQLVDYGT SLG+ P    + +GN    GG++G G   RHGR  +HRKR RDDDR+  ++S+R
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR

Query:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR
         +D ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 206.4e-9256.93Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG
        DDRPIRVDFDWGFQ+GRQWGRGRSGG                            QVRDEYRTDYDP                                  
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFG

Query:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR
                               GGYGKLVQKELEAQRQLVDYGT SLG+ P    + +GN    GG++G G   RHGR  +HRKR RDDDR+  ++S+R
Subjt:  MLDMCLDESVSSEVYMLPTLQLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVM-SQHGN---HGGSHGHG--YRHGRDYHHRKRHRDDDRHAHESSKR

Query:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR
         +D ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  TSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACTGTTCAAGGACCCATCAAAGCTCTCTGTTTATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAACATGCACTGCTGTCTTCAACCACCGTTTA
TGTGGGAAATATGTCCTTTTATACGACTGAAGAACAAGTTTATGAGCTCTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACAC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTTAAATTTATTAGTGGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGAT
TGGGGATTTCAGGATGGCAGACAATGGGGCCGTGGTCGAAGTGGTGGGCAGGTACTGTTTCTGACCTATGTTACTTTCACGACTCGGAGTTTACCATCACTTCCTGTTTA
TTTTCTTTTTCTTTTTTGTACACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGATATCCTTTTTTCTTTTAATACTGTTACTCACGTTATAGATTATAAACCCT
TGAGTCTGATGCTCTGTTGCATTTTTTTGGAATTAGACATGTTTTTTGGCATGTTGGACATGTGTCTGGATGAATCTGTGTCCAGCGAAGTGTACATGCTTCCTACATTA
CAACTACTAGGTGGTTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGATTCACTAGGCTCTATGCCGCCAGTCATGTCTCA
GCATGGAAACCATGGTGGAAGCCACGGACATGGGTATCGTCATGGTAGAGATTACCACCACCGTAAGCGCCACCGGGATGATGATCGCCATGCCCATGAAAGCTCTAAGA
GAACTTCAGATTTTGAGTCTAGAAGAAACTCCAATCATGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGACGATGATCGA
AAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
TATTATTGCATTACGCAGCGCTAGGGAAGAAGCGCGCGAGCAGCATTGGGCGACTGAGCGCACCCAACGAGTTCAGCTCTTAGGCAAAATCCAATCCGAAATTCACCTGC
TACTTCGATTTGAAGCGCCTCTAATCTCTGTGCCTCTACCTCCTCCTTTTTCCCTTCCGTTTCTCGATCTTCGTGATTAAATTATTGCCTAATTTCTGAAATATAATGCT
ATAGTTACTTCGGCTGAAGTGGGGTTTCGAGTTGTAGCGCAGATTTTGTTATTCTAGGGTTCATGGCTTCACTGTTCAAGGACCCATCAAAGCTCTCTGTTTATCGGGAT
AGAAGATTTCAGGGAACACAAGATGAATTTGAACATGCACTGCTGTCTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACGACTGAAGAACAAGTTTATGAGCT
CTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGG
ATGCTGTTAAATTTATTAGTGGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGACAATGGGGCCGTGGTCGAAGTGGTGGG
CAGGTACTGTTTCTGACCTATGTTACTTTCACGACTCGGAGTTTACCATCACTTCCTGTTTATTTTCTTTTTCTTTTTTGTACACAGGTGCGTGATGAATATCGAACAGA
CTATGATCCTGATATCCTTTTTTCTTTTAATACTGTTACTCACGTTATAGATTATAAACCCTTGAGTCTGATGCTCTGTTGCATTTTTTTGGAATTAGACATGTTTTTTG
GCATGTTGGACATGTGTCTGGATGAATCTGTGTCCAGCGAAGTGTACATGCTTCCTACATTACAACTACTAGGTGGTTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCA
CAGAGGCAGCTTGTGGATTATGGTACTGATTCACTAGGCTCTATGCCGCCAGTCATGTCTCAGCATGGAAACCATGGTGGAAGCCACGGACATGGGTATCGTCATGGTAG
AGATTACCACCACCGTAAGCGCCACCGGGATGATGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTTTGAGTCTAGAAGAAACTCCAATCATGAATCCAGAC
CGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGACGATGATCGAAAGCAGCGACACTAACCAGAGTGTCGTCGTCATATTATCATGTGAGGA
ACCTTAAATTGGCATTGCTTAGTTCAGCACAAATGATAAGGGACGACAAAACTAGCGAGTTATCTTTTTTTCATGTCACGAGGTACTTTTTCTTAGTTTAATGAAGGAAT
GGCTTTAATTGGTGTCATTGTCTGTGCTGTTTATTTATAAGAATCAAGTAGGCATGTTGTCGAACTATGTTCTAAAAGATAAATTATACAACTCTGAACAGAAAGTACTA
TCAGCTAGTGTGTTTTTGTGCATTGAATTGAATTTGAATGTAGTTGAGAGGGAAAACTACCATTCATTTTAGTATCAAAACTACAATTTGTTTTTGTTTG
Protein sequenceShow/hide protein sequence
MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVLFLTYVTFTTRSLPSLPVYFLFLFCTQVRDEYRTDYDPDILFSFNTVTHVIDYKPLSLMLCCIFLELDMFFGMLDMCLDESVSSEVYMLPTL
QLLGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGGSHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFESRRNSNHESRPEKNPRFRESGDSDEEDDDDR
KQRH