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Carg05133 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05133
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationCarg_Chr07:3091694..3092240
RNA-Seq ExpressionCarg05133
SyntenyCarg05133
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026975.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-47100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLN
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLN
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLN

Query:  FLDLS
        FLDLS
Subjt:  FLDLS

XP_022947067.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]4.1e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_022947068.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]4.1e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_022971141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]2.7e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_023534316.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]4.1e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A0A0LN06 Uncharacterized protein3.3e-3486.96Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGA
        MASIGARS FRS SGSARRAAAHIGSQ ++SS SPFRMATNKPLSHRTFRCA EMSFCLES+MPFHS SS+ALM SMLSISR SCGWLPEGA
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGA

A0A6J1G5E8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.0e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1G5L1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X22.0e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1I155 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.3e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1I2H5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.3e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.5e-0740.86Show/hide
Query:  GARSVFRSLSGSARRAAAHIGSQARSSSGSP--FRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTD
        GARS+ R  + S+R AAA  G  A  +  +P  FR    +       R   E+SFC+ES++P+HSA+++ALM S LSIS ++ GWL +    D
Subjt:  GARSVFRSLSGSARRAAAHIGSQARSSSGSP--FRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTD

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein8.7e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT1G28395.2 unknown protein8.7e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT1G28395.3 unknown protein8.7e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT2G33847.1 unknown protein5.1e-1144.44Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTD
        ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+H+A+++AL+ SMLS+S RS  W  +  + D
Subjt:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTD

AT2G33847.2 unknown protein5.1e-1146.51Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+H+A+++AL+ SMLS+S RS  W  +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCAGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCG
AATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCCGCAGCTTTGA
TGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGCTAACTGATAATTTAGTTCTCAACTTTCTTGATCTGTCATGA
mRNA sequenceShow/hide mRNA sequence
AGTAGGGTTTTAGCGTTAACCCTCGCCGGCAACGAAGCAAGACTCGAGTTCTTTCAGAATCTATCATTTCTTCTGAGTAACAATGGCCTCAATTGGCGCTAGATCCGTTT
TCCGATCACTTTCCGGCTCAGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCAT
CGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCCGCAGCTTTGATGATTTCAATGCTCTCTATCTCACGCCG
CAGCTGCGGTTGGCTTCCCGAAGGTGCGCTAACTGATAATTTAGTTCTCAACTTTCTTGATCTGTCATGA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGALTDNLVLNFLDLS