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Carg05156 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05156
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationCarg_Chr07:3222712..3223206
RNA-Seq ExpressionCarg05156
SyntenyCarg05156
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604917.1 hypothetical protein SDJN03_02234, partial [Cucurbita argyrosperma subsp. sororia]6.6e-84100Show/hide
Query:  MLYFSIAKRNSFPIEKFIEEEKKEVTFVSDRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEISLPTGHYVSHE
        MLYFSIAKRNSFPIEKFIEEEKKEVTFVSDRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEISLPTGHYVSHE
Subjt:  MLYFSIAKRNSFPIEKFIEEEKKEVTFVSDRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEISLPTGHYVSHE

Query:  FEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEIGGRK
        FEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEIGGRK
Subjt:  FEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEIGGRK

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]4.6e-4563.84Show/hide
Query:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL
        MLYFSI+KR+S PI+KF+       EE++KE+TF SD       S+PT   LL ESECADDNFTTTE+SEV W  FD   +KA++  +SD+GSISDEESL
Subjt:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL

Query:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        IEI+LPTGHYVS +F+  DE+E+EDD    Y++L +F  QKKNL+E+LAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

XP_022943897.1 uncharacterized protein LOC111448485 [Cucurbita moschata]3.5e-4564.37Show/hide
Query:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS
        MLYFSI+K N FP+ K +    ++E+KE+TF+S         S+PT   LL ESECADDNFTTTE+SEV W  FDR  A  L +SD+GSISDEESLIEI+
Subjt:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS

Query:  LPTGHYVSHEF-EDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        LPTGHYVSH+  +D++++EDDMS C+++L EF+  K+KKNL+ELLAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  LPTGHYVSHEF-EDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

XP_022985724.1 uncharacterized protein LOC111483694 [Cucurbita maxima]2.7e-4564.74Show/hide
Query:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS
        MLYFSI+K N FP+ K +    +EE+KE+TF+S         S+PT   LL ESECADDNFTTTE+SEV W  FDR  AK L +SD+GSISDEESLIEI+
Subjt:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS

Query:  LPTGHYVSHEFEDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        LPTGHYV+H+  D+++++DDMS C+++L EF+  K+KKNL+ELLAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  LPTGHYVSHEFEDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]6.4e-4764.97Show/hide
Query:  MLYFSIAKRNSFPIEKFI--------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEES
        MLYFSI+KRNS PI+KF+        EE++K++TF SD       S+PT G LL ESECADDNFTTTE+SEV W  FD   +K    D+SD+GSISDEES
Subjt:  MLYFSIAKRNSFPIEKFI--------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEES

Query:  LIEISLPTGHYVSHEFED-EEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        LIEI+LPTGHYVSH+F+D ++E+ED MS  Y++L +F  QKKNL+E+LAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  LIEISLPTGHYVSHEFED-EEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

TrEMBL top hitse value%identityAlignment
A0A0A0KCP7 Uncharacterized protein1.0e-4565.32Show/hide
Query:  MLYFSIAKRNSFPIEKFI-----EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFD-RF-KAKTLDQSDEGSISDEESLIE
        MLYFSI+KRNS PI KF+     EE++K++TF SD       S+PT   LL ESECADDNFTTTE+SEV W  FD RF K +   +SD+GSISDEESLIE
Subjt:  MLYFSIAKRNSFPIEKFI-----EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFD-RF-KAKTLDQSDEGSISDEESLIE

Query:  ISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        I+LPTGHYVS +F+D +E+EDD+S  Y++L +F  Q+KNL+E+LAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  ISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

A0A1S3CMD0 uncharacterized protein LOC1035021112.2e-4563.84Show/hide
Query:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL
        MLYFSI+KR+S PI+KF+       EE++KE+TF SD       S+PT   LL ESECADDNFTTTE+SEV W  FD   +KA++  +SD+GSISDEESL
Subjt:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL

Query:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        IEI+LPTGHYVS +F+  DE+E+EDD    Y++L +F  QKKNL+E+LAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

A0A5D3CJH9 Uncharacterized protein2.2e-4563.84Show/hide
Query:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL
        MLYFSI+KR+S PI+KF+       EE++KE+TF SD       S+PT   LL ESECADDNFTTTE+SEV W  FD   +KA++  +SD+GSISDEESL
Subjt:  MLYFSIAKRNSFPIEKFI-------EEEKKEVTFVSDR-----KSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDR--FKAKTLDQSDEGSISDEESL

Query:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        IEI+LPTGHYVS +F+  DE+E+EDD    Y++L +F  QKKNL+E+LAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  IEISLPTGHYVSHEFE--DEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

A0A6J1FUA8 uncharacterized protein LOC1114484851.7e-4564.37Show/hide
Query:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS
        MLYFSI+K N FP+ K +    ++E+KE+TF+S         S+PT   LL ESECADDNFTTTE+SEV W  FDR  A  L +SD+GSISDEESLIEI+
Subjt:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS

Query:  LPTGHYVSHEF-EDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        LPTGHYVSH+  +D++++EDDMS C+++L EF+  K+KKNL+ELLAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  LPTGHYVSHEF-EDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

A0A6J1JE34 uncharacterized protein LOC1114836941.3e-4564.74Show/hide
Query:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS
        MLYFSI+K N FP+ K +    +EE+KE+TF+S         S+PT   LL ESECADDNFTTTE+SEV W  FDR  AK L +SD+GSISDEESLIEI+
Subjt:  MLYFSIAKRNSFPIEKFI----EEEKKEVTFVS------DRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEIS

Query:  LPTGHYVSHEFEDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        LPTGHYV+H+  D+++++DDMS C+++L EF+  K+KKNL+ELLAEINDI +EENLIEIDISMGSIKYSRFEI
Subjt:  LPTGHYVSHEFEDEEEEEDDMSSCYRELPEFE--KQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04480.1 unknown protein1.2e-1448.91Show/hide
Query:  KTLDQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI
        KT ++ D+G+I D+ESLIE+SLP+GHY+ H +   +         + ++ +F      L +LL EIND  +E+NLIEIDIS+GSIKYSRFEI
Subjt:  KTLDQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDI-DEENLIEIDISMGSIKYSRFEI

AT5G35870.1 unknown protein1.9e-1247.73Show/hide
Query:  DQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEI
        +  D+G+I DEESLIE+SLP+GHY+ H +     ++ D    Y  +P+F      L++L AE  D   +NLIEIDIS+GSIK SRF+I
Subjt:  DQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEDDMSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTATTTTTCAATCGCCAAAAGAAATTCATTTCCAATTGAGAAATTCATCGAAGAAGAAAAAAAAGAAGTGACTTTTGTCTCTGATCGGAAATCCTCGCCGACGGC
CGGCGGTTTACTGCCGGAGAGTGAATGTGCCGACGATAATTTCACAACCACCGAGGACTCCGAAGTGGGGTGGGGGGCTTTCGACCGGTTTAAGGCAAAAACCCTAGACC
AGTCCGATGAGGGTTCGATTTCCGACGAGGAAAGTTTGATCGAGATCTCTCTCCCGACCGGTCATTATGTCAGCCACGAGTTCGAGGATGAGGAAGAAGAAGAGGACGAC
ATGTCGTCTTGTTACCGGGAGCTACCGGAATTTGAGAAGCAGAAGAAGAATCTTATGGAGCTGTTGGCTGAAATTAACGACATCGACGAGGAGAATTTGATAGAGATCGA
CATATCCATGGGCTCCATTAAGTATTCAAGGTTTGAAATTGGAGGAAGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTATTTTTCAATCGCCAAAAGAAATTCATTTCCAATTGAGAAATTCATCGAAGAAGAAAAAAAAGAAGTGACTTTTGTCTCTGATCGGAAATCCTCGCCGACGGC
CGGCGGTTTACTGCCGGAGAGTGAATGTGCCGACGATAATTTCACAACCACCGAGGACTCCGAAGTGGGGTGGGGGGCTTTCGACCGGTTTAAGGCAAAAACCCTAGACC
AGTCCGATGAGGGTTCGATTTCCGACGAGGAAAGTTTGATCGAGATCTCTCTCCCGACCGGTCATTATGTCAGCCACGAGTTCGAGGATGAGGAAGAAGAAGAGGACGAC
ATGTCGTCTTGTTACCGGGAGCTACCGGAATTTGAGAAGCAGAAGAAGAATCTTATGGAGCTGTTGGCTGAAATTAACGACATCGACGAGGAGAATTTGATAGAGATCGA
CATATCCATGGGCTCCATTAAGTATTCAAGGTTTGAAATTGGAGGAAGGAAATAA
Protein sequenceShow/hide protein sequence
MLYFSIAKRNSFPIEKFIEEEKKEVTFVSDRKSSPTAGGLLPESECADDNFTTTEDSEVGWGAFDRFKAKTLDQSDEGSISDEESLIEISLPTGHYVSHEFEDEEEEEDD
MSSCYRELPEFEKQKKNLMELLAEINDIDEENLIEIDISMGSIKYSRFEIGGRK