; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05182 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05182
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationCarg_Chr07:3360162..3361987
RNA-Seq ExpressionCarg05182
SyntenyCarg05182
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027023.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-181100Show/hide
Query:  MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK
        MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK
Subjt:  MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK

Query:  LSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK
        LSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK
Subjt:  LSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK

Query:  DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
        DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
Subjt:  DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE

Query:  HFNKKIERAFGRYTLEIKNNLERGTALPD
        HFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  HFNKKIERAFGRYTLEIKNNLERGTALPD

XP_022947463.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]1.5e-17299.68Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022971056.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]4.1e-17098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023532640.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]1.3e-17999.39Show/hide
Query:  MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK
        MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK
Subjt:  MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDK

Query:  LSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK
        LSG ENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK
Subjt:  LSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK

Query:  DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
        DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE
Subjt:  DPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNE

Query:  HFNKKIERAFGRYTLEIKNNLERGTALPD
        HFNKKIERAFGRYTLEIKNNLERGTALPD
Subjt:  HFNKKIERAFGRYTLEIKNNLERGTALPD

XP_023532641.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]9.9e-17299.37Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF26.3e-16493.65Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+NEPV TSSE VQAGRSS  S+F PPDEYEDLHDEKP+EEGHSDGD DK SG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF26.0e-16795.87Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1G6N2 Pre-mRNA-splicing factor SYF27.4e-17399.68Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1I290 Pre-mRNA-splicing factor SYF22.0e-17098.1Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF21.3e-16695.56Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf21.7e-2539.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q6DGP2 Pre-mRNA-splicing factor syf21.2e-2338.14Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL  K NEARK N   +  E K+++ PS     +   + + L D+KKK          D  K   +  ++A   + KK +++P P G+  + + 
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y++ TK +  D+E Y K KE    +F+  ++SL YG     S+D I+ MV +++ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf21.2e-2338.14Show/hide
Query:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A G D  +  +L+ + E AE   +K +K     G+  +   
Subjt:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         +   Y++ T+ +  DLE+Y K++ ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf25.9e-2639.73Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF21.6e-2339.07Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein4.8e-11670.57Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTK
        M  E RVHPDC NASNPYHEC EYCF+ IAE KAR  +QN  +A   E  +           P D+     D   EEE   D    ++        D T+
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTK

Query:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK
        LTGR+KKLFELRLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAESKYKKWEK+P P GWDVFNQK
Subjt:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
        TLY+AYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL DRE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTALPD
        TLEIKNNLERGTALPD
Subjt:  TLEIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGA
GTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCAGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATT
TTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGAC
TTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGA
ACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACA
TGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAA
AAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAA
GATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGATT
CTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA
mRNA sequenceShow/hide mRNA sequence
TATTTTAAAGCTCCGTTTAATTATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTA
ATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCAGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGT
CGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGG
TGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAG
CTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGC
TTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAA
AACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTC
TTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTC
CACGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCG
AGGAACTGCATTGCCTGATTAA
Protein sequenceShow/hide protein sequence
MTLYLQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGD
FTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYK
KRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD