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Carg05184 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05184
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUBC core domain-containing protein
Genome locationCarg_Chr07:3366251..3366902
RNA-Seq ExpressionCarg05184
SyntenyCarg05184
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604947.1 putative ubiquitin-conjugating enzyme E2 23, partial [Cucurbita argyrosperma subsp. sororia]1.0e-27100Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
KAG7027025.1 putative ubiquitin-conjugating enzyme E2 23, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-57100Show/hide
Query:  MEREDGMPARTLGPKGGGFNLSEFMDFEETWALERTFQEAWIITASLACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGA
        MEREDGMPARTLGPKGGGFNLSEFMDFEETWALERTFQEAWIITASLACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGA
Subjt:  MEREDGMPARTLGPKGGGFNLSEFMDFEETWALERTFQEAWIITASLACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGA

Query:  DCRDFKHFQQL
        DCRDFKHFQQL
Subjt:  DCRDFKHFQQL
KAG7027026.1 putative ubiquitin-conjugating enzyme E2 23, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-27100Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
XP_022947462.1 probable ubiquitin-conjugating enzyme E2 23 [Cucurbita moschata]1.0e-27100Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
XP_023534561.1 probable ubiquitin-conjugating enzyme E2 23 isoform X2 [Cucurbita pepo subsp. pepo]1.0e-27100Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
TrEMBL top hitse value%identityAlignment
A0A1S3C7G0 probable ubiquitin-conjugating enzyme E2 23 isoform X27.1e-2796.88Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC+DF HFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
A0A5A7TSB9 Putative ubiquitin-conjugating enzyme E2 23 isoform X27.1e-2796.88Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC+DF HFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
A0A5D3BKI9 Putative ubiquitin-conjugating enzyme E2 23 isoform X27.1e-2796.88Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC+DF HFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
A0A6J1G6I7 probable ubiquitin-conjugating enzyme E2 234.9e-28100Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
A0A6J1I476 probable ubiquitin-conjugating enzyme E2 234.1e-2798.44Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
        ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEV ADCRDFKHFQQL
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQL
SwissProt top hitse value%identityAlignment
Q8VY10 Probable ubiquitin-conjugating enzyme E2 243.9e-0647.27Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC
        AC AYM+G  +GS    A+++  S  NST  GFK+ML+K+ PKL  + +E+G DC
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC
Q9ZVX1 Probable ubiquitin-conjugating enzyme E2 235.6e-2178.12Show/hide
Query:  ACDAYMKGHLIGSLTEDAS-IREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQ
        ACDAYMKG+LIGSLT+DAS I E S  NSTSVGFKLMLAKI PKLFS+L+EVGADC +F+H QQ
Subjt:  ACDAYMKGHLIGSLTEDAS-IREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQ
Arabidopsis top hitse value%identityAlignment
AT2G16920.1 ubiquitin-conjugating enzyme 234.0e-2278.12Show/hide
Query:  ACDAYMKGHLIGSLTEDAS-IREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQ
        ACDAYMKG+LIGSLT+DAS I E S  NSTSVGFKLMLAKI PKLFS+L+EVGADC +F+H QQ
Subjt:  ACDAYMKGHLIGSLTEDAS-IREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQ
AT2G33770.1 phosphate 22.8e-0747.27Show/hide
Query:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC
        AC AYM+G  +GS    A+++  S  NST  GFK+ML+K+ PKL  + +E+G DC
Subjt:  ACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGAGGACGGAATGCCAGCGAGGACGCTGGGACCTAAAGGTGGTGGATTTAACTTGAGCGAATTTATGGACTTTGAAGAAACCTGGGCATTAGAAAGAACATT
TCAGGAGGCGTGGATAATTACAGCCTCGTTGGCCTGTGATGCATACATGAAAGGTCACTTAATTGGCTCTCTCACAGAAGATGCCTCTATAAGAGAAGAAAGCGATCCCA
ACTCCACGTCAGTCGGGTTTAAGCTTATGCTCGCTAAGATTGTTCCGAAGCTCTTCTCGTCGTTGAACGAAGTCGGAGCTGATTGTCGCGATTTTAAGCATTTTCAACAG
TTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGAGGACGGAATGCCAGCGAGGACGCTGGGACCTAAAGGTGGTGGATTTAACTTGAGCGAATTTATGGACTTTGAAGAAACCTGGGCATTAGAAAGAACATT
TCAGGAGGCGTGGATAATTACAGCCTCGTTGGCCTGTGATGCATACATGAAAGGTCACTTAATTGGCTCTCTCACAGAAGATGCCTCTATAAGAGAAGAAAGCGATCCCA
ACTCCACGTCAGTCGGGTTTAAGCTTATGCTCGCTAAGATTGTTCCGAAGCTCTTCTCGTCGTTGAACGAAGTCGGAGCTGATTGTCGCGATTTTAAGCATTTTCAACAG
TTGTAG
Protein sequenceShow/hide protein sequence
MEREDGMPARTLGPKGGGFNLSEFMDFEETWALERTFQEAWIITASLACDAYMKGHLIGSLTEDASIREESDPNSTSVGFKLMLAKIVPKLFSSLNEVGADCRDFKHFQQ
L