; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg05248 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg05248
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationCarg_Chr07:3739746..3740210
RNA-Seq ExpressionCarg05248
SyntenyCarg05248
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595072.1 hypothetical protein SDJN03_11625, partial [Cucurbita argyrosperma subsp. sororia]4.0e-7598.7Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG RKKFAANLS IPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

KAG7027087.1 hypothetical protein SDJN02_11097, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-76100Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

XP_022963140.1 uncharacterized protein LOC111463438 [Cucurbita moschata]1.4e-7599.35Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG RKKFAANLSAIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

XP_023003596.1 uncharacterized protein LOC111497150 [Cucurbita maxima]1.4e-7294.16Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDG+LQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDALSAI+DEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSP+VF +EELKTRKRLSAGRSGAG R KFAANL+AIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

XP_023518464.1 uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]1.3e-7396.75Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAI+D+EELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSP+VFTVEELKTRKRLSAGRSGAG R KFAANLSAIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB4 Uncharacterized protein6.5e-7192.21Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAIND+EELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKC  GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAG RKKFAANL AIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

A0A1S3B0H3 uncharacterized protein LOC1034847219.4e-7090.26Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAIND+EELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKC  GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAG RKKFAANL AIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

A0A5D3CRH4 HTH-type transcriptional regulator protein ptxE9.4e-7090.26Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL+DGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAIND+EELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKC  GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAG RKKFAANL AIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

A0A6J1HH54 uncharacterized protein LOC1114634386.7e-7699.35Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG RKKFAANLSAIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

A0A6J1KPP1 uncharacterized protein LOC1114971506.9e-7394.16Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESTAVATAKLILNDG+LQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDALSAI+DEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE
        MKCGAGDKCSHRRRSVSP+VF +EELKTRKRLSAGRSGAG R KFAANL+AIPE
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein2.6e-1640.44Show/hide
Query:  MGICSSSES----TAVATAKLILNDGSLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQA
        MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+CNSD + +DD + AI  +E LQ  Q+YF LP+S+ +  L A
Subjt:  MGICSSSES----TAVATAKLILNDGSLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQA

Query:  EEMAALAVKANSALMKCGAGDKCSHRRRS--VSPLV
         +MAALAVKA+ A+ K  A  K + RRRS  +SP+V
Subjt:  EEMAALAVKANSALMKCGAGDKCSHRRRS--VSPLV

AT2G23690.1 unknown protein2.3e-4460.98Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSS EST VATAKLIL+DG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ +SAI+ +EE QLGQLYFALPLS L   L+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAG---DKCSHRRRSVSPLVFTVEEL-------KTRKRLSAGRSGAGARKKFAANLSAIPE
        M+ G     DKC  RR+ VSP++F+   +       +TR     G  G+G R+K+AA LS I E
Subjt:  MKCGAG---DKCSHRRRSVSPLVFTVEEL-------KTRKRLSAGRSGAGARKKFAANLSAIPE

AT3G50800.1 unknown protein9.0e-3352.53Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+   E+L+ G+LYF LPL+ L  PL+A+EMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG----ARKKFAANLSAIPE
         K G G   S+    V         ++  KR   G  G G     R+KF A LS+I E
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG----ARKKFAANLSAIPE

AT4G37240.1 unknown protein3.4e-4064.63Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSEST VATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA++AI+ +EELQLGQ+YFALPL  L+QPL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAG----RSGAGARK
        M+ G G  C  RR+ V P+V      K R R+ +G     SG+G RK
Subjt:  MKCGAGDKCSHRRRSVSPLVFTVEELKTRKRLSAG----RSGAGARK

AT5G66580.1 unknown protein2.4e-3353.85Show/hide
Query:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA+SA+   EEL+ GQLYF LPL+ L  PL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKC-GAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG-ARKKFAANLSAIPE
         K  G G        + S   +  + +   K    G  G G  +++F ANLS I E
Subjt:  MKC-GAGDKCSHRRRSVSPLVFTVEELKTRKRLSAGRSGAG-ARKKFAANLSAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCT
TCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGC
CACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGCAAGAAAAAAGTTCGCGGC
GAATTTATCGGCGATACCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCAGTTCATCGGAATCCACCGCCGTCGCCACCGCCAAACTAATCCTCAACGATGGAAGTCTGCAGGAATTTTCGTATCCTGTTAAGGTTTCCTACGTTCT
TCAAAAGAATCCGTCGTGCTTTATTTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGTCGGCTATTAATGACGAGGAGGAGCTTCAACTCGGACAGCTCTATTTTG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCCGAGGAAATGGCCGCATTGGCCGTCAAGGCTAACTCTGCGCTCATGAAATGTGGCGCCGGTGATAAATGCAGC
CACCGGCGGAGATCTGTGTCTCCATTAGTTTTCACAGTTGAGGAACTCAAGACTCGCAAGAGACTCTCCGCCGGCCGTAGTGGCGCCGGTGCAAGAAAAAAGTTCGCGGC
GAATTTATCGGCGATACCCGAGTAG
Protein sequenceShow/hide protein sequence
MGICSSSESTAVATAKLILNDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDEEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGAGDKCS
HRRRSVSPLVFTVEELKTRKRLSAGRSGAGARKKFAANLSAIPE